Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EUZ85_RS04840 Genome accession   NZ_CP035490
Coordinates   1095573..1095959 (-) Length   128 a.a.
NCBI ID   WP_011394528.1    Uniprot ID   -
Organism   Hahella sp. KA22     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1090573..1100959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUZ85_RS04820 (EUZ85_04820) - 1091488..1092381 (-) 894 WP_011394524.1 protein-glutamate O-methyltransferase CheR -
  EUZ85_RS04825 (EUZ85_04825) - 1092446..1094512 (-) 2067 WP_206617997.1 methyl-accepting chemotaxis protein -
  EUZ85_RS04830 (EUZ85_04830) - 1094590..1095132 (-) 543 WP_127968179.1 chemotaxis protein CheW -
  EUZ85_RS04835 (EUZ85_04835) pilH 1095151..1095513 (-) 363 WP_011394527.1 twitching motility response regulator PilH -
  EUZ85_RS04840 (EUZ85_04840) pilG 1095573..1095959 (-) 387 WP_011394528.1 twitching motility response regulator PilG Regulator
  EUZ85_RS04845 (EUZ85_04845) gshB 1096341..1097309 (+) 969 WP_127968180.1 glutathione synthase -
  EUZ85_RS04850 (EUZ85_04850) - 1097316..1098209 (+) 894 WP_206617998.1 energy transducer TonB -
  EUZ85_RS04855 (EUZ85_04855) - 1098304..1098861 (+) 558 WP_127968181.1 YqgE/AlgH family protein -
  EUZ85_RS04860 (EUZ85_04860) ruvX 1098905..1099381 (+) 477 WP_127968182.1 Holliday junction resolvase RuvX -
  EUZ85_RS04865 (EUZ85_04865) pyrR 1099365..1099880 (+) 516 WP_127968183.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EUZ85_RS04870 (EUZ85_04870) - 1099940..1100944 (+) 1005 WP_127968184.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14250.59 Da        Isoelectric Point: 8.4951

>NTDB_id=342765 EUZ85_RS04840 WP_011394528.1 1095573..1095959(-) (pilG) [Hahella sp. KA22]
MEDNFENLKIMVIDDSKTIRRTAETLLKKVGCTVITATDGFDALAKIADSHPDIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLGTIRNHLPKK

Nucleotide


Download         Length: 387 bp        

>NTDB_id=342765 EUZ85_RS04840 WP_011394528.1 1095573..1095959(-) (pilG) [Hahella sp. KA22]
ATGGAAGATAACTTTGAAAACCTCAAAATTATGGTGATTGACGATAGTAAGACGATTCGTCGCACGGCCGAAACGCTTCT
GAAAAAAGTCGGCTGCACTGTAATTACCGCGACAGACGGTTTCGACGCCTTGGCAAAAATCGCCGATTCTCACCCGGACA
TCATTTTTGTCGATATAATGATGCCCCGGCTCGACGGCTACCAGACCTGCGCACTTATCAAAAACAACAGCGCATTCAAG
AGCACTCCCGTTATTATGCTGTCAAGCAAAGACGGACTCTTCGACAAGGCCAAGGGACGCATTGTGGGGTCGGACCAGTA
TTTGACCAAGCCTTTCAGCAAGGACGAACTACTGGGTACAATTCGAAATCATTTGCCGAAGAAATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

97.656

0.766
  vicR Streptococcus mutans UA159

43.697

92.969

0.406
  pilH Synechocystis sp. PCC 6803

41.379

90.625

0.375

Multiple sequence alignment