Detailed information NTG0342600

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: F7V86_RS01065
• Genome accession: NZ_CP044444
• Coordinates: 211592..212596 (-)
• Length: 334 a.a.
• NCBI ID: WP_151140044.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain KC41
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 206592..217596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F7V86_RS01040	-	207555..208187 (+)	633	WP_003152390.1	GNAT family N-acetyltransferase	-
F7V86_RS01045	-	208212..208856 (+)	645	WP_025649732.1	acetoin utilization AcuB family protein	-
F7V86_RS01050	-	208853..210019 (+)	1167	WP_014418653.1	acetoin utilization protein AcuC	-
F7V86_RS01055	motS	210029..210718 (-)	690	WP_003152387.1	flagellar motor protein MotS	-
F7V86_RS01060	motP	210708..211523 (-)	816	WP_007408775.1	flagellar motor protein MotP	-
F7V86_RS01065	ccpA	211592..212596 (-)	1005	WP_151140044.1	catabolite control protein A	Regulator
F7V86_RS01070	-	212875..213951 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
F7V86_RS01075	ytxJ	214188..214514 (-)	327	WP_017418385.1	bacillithiol system redox-active protein YtxJ	-
F7V86_RS01080	-	214540..214953 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
F7V86_RS01085	-	214986..215408 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
F7V86_RS01090	murC	215567..216865 (-)	1299	WP_017418386.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.33 Da
• Isoelectric Point: 5.0204

>NTDB_id=342600 F7V86_RS01065 WP_151140044.1 211592..212596(-) (ccpA) [Bacillus amyloliquefaciens strain KC41]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEKFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=342600 F7V86_RS01065 WP_151140044.1 211592..212596(-) (ccpA) [Bacillus amyloliquefaciens strain KC41]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTACCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACAACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTTGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTTATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGAAATTTGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503