Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ETT44_RS04805 Genome accession   NZ_CP035455
Coordinates   895567..896877 (+) Length   436 a.a.
NCBI ID   WP_136021823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 890567..901877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS04785 (ETT44_04785) phoU 891158..891811 (+) 654 WP_002984514.1 phosphate signaling complex protein PhoU -
  ETT44_RS04795 (ETT44_04795) - 892016..894553 (+) 2538 WP_011054529.1 M1 family metallopeptidase -
  ETT44_RS04800 (ETT44_04800) ciaR 894900..895574 (+) 675 WP_002984519.1 response regulator transcription factor Regulator
  ETT44_RS04805 (ETT44_04805) ciaH 895567..896877 (+) 1311 WP_136021823.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ETT44_RS04810 (ETT44_04810) rpsT 897002..897250 (-) 249 WP_009881183.1 30S ribosomal protein S20 -
  ETT44_RS04815 (ETT44_04815) coaA 897304..898224 (-) 921 WP_010922353.1 type I pantothenate kinase -
  ETT44_RS04820 (ETT44_04820) - 898492..899085 (+) 594 WP_002989699.1 class I SAM-dependent methyltransferase -
  ETT44_RS04825 (ETT44_04825) - 899736..900125 (+) 390 WP_002984531.1 cytidine deaminase -
  ETT44_RS04830 (ETT44_04830) - 900219..901271 (+) 1053 WP_134984594.1 BMP family protein -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50184.72 Da        Isoelectric Point: 9.0830

>NTDB_id=342522 ETT44_RS04805 WP_136021823.1 895567..896877(+) (ciaH) [Streptococcus pyogenes strain emm197]
MNKLKKEILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKRRLESIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIVKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=342522 ETT44_RS04805 WP_136021823.1 895567..896877(+) (ciaH) [Streptococcus pyogenes strain emm197]
ATGAATAAATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGATAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAACGCCGGTTGGAGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACTGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGCATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGTGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.666

100

0.578

  ciaH Streptococcus pneumoniae Rx1

51.142

100

0.514

  ciaH Streptococcus pneumoniae D39

51.142

100

0.514

  ciaH Streptococcus pneumoniae R6

51.142

100

0.514

  ciaH Streptococcus pneumoniae TIGR4

51.142

100

0.514


Multiple sequence alignment