Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ETT50_RS07370 Genome accession   NZ_CP035449
Coordinates   1422048..1423049 (-) Length   333 a.a.
NCBI ID   WP_032464863.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm56     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1417048..1428049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS07355 (ETT50_07355) thrS 1417218..1419161 (-) 1944 WP_032464864.1 threonine--tRNA ligase -
  ETT50_RS07360 (ETT50_07360) - 1419583..1420917 (-) 1335 WP_011284590.1 glycosyltransferase family 4 protein -
  ETT50_RS07365 (ETT50_07365) - 1420919..1421917 (-) 999 WP_002985678.1 glycosyltransferase family 4 protein -
  ETT50_RS07370 (ETT50_07370) ccpA 1422048..1423049 (-) 1002 WP_032464863.1 catabolite control protein A Regulator
  ETT50_RS07375 (ETT50_07375) - 1423223..1424308 (+) 1086 WP_002985682.1 aminopeptidase P family protein -
  ETT50_RS07380 (ETT50_07380) - 1424357..1425022 (+) 666 WP_002985684.1 NAD(P)H-dependent oxidoreductase -
  ETT50_RS07385 (ETT50_07385) - 1425033..1425410 (+) 378 WP_020904973.1 VOC family protein -
  ETT50_RS07390 (ETT50_07390) - 1425555..1426481 (+) 927 WP_032464862.1 glycosyltransferase family 2 protein -
  ETT50_RS07395 (ETT50_07395) - 1426692..1427375 (+) 684 WP_011017476.1 DUF969 domain-containing protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36714.77 Da        Isoelectric Point: 5.4863

>NTDB_id=342202 ETT50_RS07370 WP_032464863.1 1422048..1423049(-) (ccpA) [Streptococcus pyogenes strain emm56]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLDHQLPS
VNIDYRAAVSNVVDILAENHKCIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTE

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=342202 ETT50_RS07370 WP_032464863.1 1422048..1423049(-) (ccpA) [Streptococcus pyogenes strain emm56]
ATGAATACAGATGATACCATTACAATTTATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAATAAAAATGTTAAGGAAAATACACGTAAGAAAGTTTTAGAAGTTATTGATCGCCTTGACTATCGTCCCAATG
CTGTCGCGCGTGGTCTCGCCAGCAAAAAGACAACAACCGTTGGCGTTGTGATTCCAAATATTGCAAATAGTTATTTTTCT
ATCTTAGCTAAGGGTATTGACGATATCGCCGCTATGTACAAATATAATATTGTGCTTGCCTCCAGTGATGAAGATGATGA
CAAGGAGGTTAATGTTGTCAATACCCTTTTTGCCAAGCAAGTGGATGGTATTATTTTTATGGGGCATCACTTGACAGAAA
AAATCCGGGCCGAGTTTTCACGCTCTCGTACTCCAGTTGTTTTGGCAGGAACTGTAGATCTTGATCATCAATTACCAAGC
GTCAACATTGACTATAGAGCTGCGGTGTCAAATGTTGTTGATATTTTAGCTGAAAATCATAAGTGTATCGCTTTTGTGTC
AGGACCACTCATTGATGATATCAATGGTAAAGTGCGCTTAGCAGGTTACAAAGAAGGGTTGAAGCACAATAAGCTTGACT
TCAAAGAAGGTCTTGTTTTTGAAGCGAACTATTCTTATAAAGAAGGATTTGAATTGGCGCAGCGCGTCATTAACTCAGGA
GCAACAGCGGCTTATGTGGCTGAAGATGAATTGGCAGCGGGCCTTTTAAACGGCTTGTTTGAAGCAGGTAAACGCGTACC
AGAGGACTTTGAAATCATCACCAGCAACGATTCACCAGTGGTTCAATACACTCGTCCCAATTTGAGTTCTATCAGTCAAC
CTGTTTATGACTTAGGTGCTGTTAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGTGGGACAACTGAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.313

99.7

0.781
  ccpA Streptococcus pneumoniae D39

75.602

99.7

0.754
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment