Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ETT64_RS04375 Genome accession   NZ_CP035435
Coordinates   831036..832346 (+) Length   436 a.a.
NCBI ID   WP_011184551.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm64.3     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 826036..837346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT64_RS04355 (ETT64_04355) phoU 826627..827280 (+) 654 WP_002984514.1 phosphate signaling complex protein PhoU -
  ETT64_RS04365 (ETT64_04365) - 827485..830022 (+) 2538 WP_136292890.1 M1 family metallopeptidase -
  ETT64_RS04370 (ETT64_04370) ciaR 830369..831043 (+) 675 WP_002984519.1 response regulator transcription factor Regulator
  ETT64_RS04375 (ETT64_04375) ciaH 831036..832346 (+) 1311 WP_011184551.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ETT64_RS04380 (ETT64_04380) rpsT 832471..832719 (-) 249 WP_009881183.1 30S ribosomal protein S20 -
  ETT64_RS04385 (ETT64_04385) coaA 832773..833693 (-) 921 WP_136264051.1 type I pantothenate kinase -
  ETT64_RS04390 (ETT64_04390) - 833961..834554 (+) 594 WP_010922352.1 class I SAM-dependent methyltransferase -
  ETT64_RS04395 (ETT64_04395) - 835207..835596 (+) 390 WP_011285547.1 cytidine deaminase -
  ETT64_RS04400 (ETT64_04400) - 835690..836742 (+) 1053 WP_136262388.1 BMP family protein -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50093.61 Da        Isoelectric Point: 9.0837

>NTDB_id=341437 ETT64_RS04375 WP_011184551.1 831036..832346(+) (ciaH) [Streptococcus pyogenes strain emm64.3]
MNKLKKEILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKHRLGSIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIVKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=341437 ETT64_RS04375 WP_011184551.1 831036..832346(+) (ciaH) [Streptococcus pyogenes strain emm64.3]
ATGAATAAATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGACAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAACACCGTTTGGGGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACTGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGTATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGTGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAACTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.895

100

0.58

  ciaH Streptococcus pneumoniae Rx1

51.37

100

0.516

  ciaH Streptococcus pneumoniae D39

51.37

100

0.516

  ciaH Streptococcus pneumoniae R6

51.37

100

0.516

  ciaH Streptococcus pneumoniae TIGR4

51.37

100

0.516


Multiple sequence alignment