Detailed information NTG0341356

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: F4V26_RS03580
• Genome accession: NZ_CP044169
• Coordinates: 688957..689916 (-)
• Length: 319 a.a.
• NCBI ID: WP_002876195.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain AR-0414
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 683957..694916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F4V26_RS03550	ccoS	684914..685120 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
F4V26_RS03555	-	685143..685445 (-)	303	WP_002852762.1	cytochrome c	-
F4V26_RS03560	gmhB	685526..686087 (+)	562	Protein_677	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
F4V26_RS03565	rfaD	686088..687041 (+)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
F4V26_RS03570	rfaE1	687034..688419 (+)	1386	WP_002910336.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
F4V26_RS03575	gmhA	688416..688976 (+)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
F4V26_RS03580	waaF	688957..689916 (-)	960	WP_002876195.1	lipopolysaccharide heptosyltransferase II	Regulator
F4V26_RS03585	-	689975..690793 (+)	819	WP_002876193.1	glycosyltransferase family 2 protein	-
F4V26_RS03590	wlaTC	690796..691755 (-)	960	WP_002876191.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
F4V26_RS03595	wlaTB	691752..692708 (-)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
F4V26_RS03600	-	692701..693474 (-)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
F4V26_RS03605	-	693545..694567 (+)	1023	WP_002876190.1	hypothetical protein	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36607.08 Da
• Isoelectric Point: 10.2870

>NTDB_id=341356 F4V26_RS03580 WP_002876195.1 688957..689916(-) (waaF) [Campylobacter jejuni strain AR-0414]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=341356 F4V26_RS03580 WP_002876195.1 688957..689916(-) (waaF) [Campylobacter jejuni strain AR-0414]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTAGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.025	99.687	0.937