Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ETT67_RS05025 Genome accession   NZ_CP035432
Coordinates   976889..978199 (-) Length   436 a.a.
NCBI ID   WP_023078605.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm11     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 971889..983199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT67_RS05000 (ETT67_04990) - 972541..973593 (-) 1053 WP_002989701.1 BMP family protein -
  ETT67_RS05005 (ETT67_04995) - 973687..974076 (-) 390 WP_011285547.1 cytidine deaminase -
  ETT67_RS05010 (ETT67_05000) - 974681..975274 (-) 594 WP_010922352.1 class I SAM-dependent methyltransferase -
  ETT67_RS05015 (ETT67_05005) coaA 975542..976462 (+) 921 WP_010922353.1 type I pantothenate kinase -
  ETT67_RS05020 (ETT67_05010) rpsT 976516..976764 (+) 249 WP_009881183.1 30S ribosomal protein S20 -
  ETT67_RS05025 (ETT67_05015) ciaH 976889..978199 (-) 1311 WP_023078605.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ETT67_RS05030 (ETT67_05020) ciaR 978192..978866 (-) 675 WP_002984519.1 response regulator transcription factor Regulator
  ETT67_RS05035 (ETT67_05025) - 979212..981749 (-) 2538 WP_115224583.1 M1 family metallopeptidase -
  ETT67_RS05045 (ETT67_05035) phoU 981954..982607 (-) 654 WP_002984514.1 phosphate signaling complex protein PhoU -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50051.53 Da        Isoelectric Point: 9.0837

>NTDB_id=341275 ETT67_RS05025 WP_023078605.1 976889..978199(-) (ciaH) [Streptococcus pyogenes strain emm11]
MNKLKKDILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKHRLGSIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIAKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=341275 ETT67_RS05025 WP_023078605.1 976889..978199(-) (ciaH) [Streptococcus pyogenes strain emm11]
ATGAATAAATTAAAAAAAGATATTTTATCAGATAACTATAACCATTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGACAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAACACCGTTTGGGGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACCGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGCATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGCGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAACTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.666

100

0.578

  ciaH Streptococcus pneumoniae Rx1

51.37

100

0.516

  ciaH Streptococcus pneumoniae D39

51.37

100

0.516

  ciaH Streptococcus pneumoniae R6

51.37

100

0.516

  ciaH Streptococcus pneumoniae TIGR4

51.37

100

0.516


Multiple sequence alignment