Detailed information NTG0341036

Bioinformatically predicted

Overview

• Name: comYF
• Type: Machinery gene
• Locus tag: ETT71_RS00685
• Genome accession: NZ_CP035428
• Coordinates: 104874..105308 (+)
• Length: 144 a.a.
• NCBI ID: WP_002992738.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain emmSTG866.1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 99874..110308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETT71_RS00655 (ETT71_00655)	-	101543..101908 (+)	366	WP_002986560.1	DUF1033 family protein	-
ETT71_RS00660 (ETT71_00660)	comYA	102001..102939 (+)	939	WP_047235612.1	competence type IV pilus ATPase ComGA	Machinery gene
ETT71_RS00665 (ETT71_00665)	comYB	102875..103909 (+)	1035	WP_011054115.1	competence type IV pilus assembly protein ComGB	Machinery gene
ETT71_RS00670 (ETT71_00670)	comYC	103911..104237 (+)	327	WP_002986552.1	competence type IV pilus major pilin ComGC	Machinery gene
ETT71_RS00675 (ETT71_00675)	comGD	104212..104640 (+)	429	WP_002986548.1	competence type IV pilus minor pilin ComGD	-
ETT71_RS00680 (ETT71_00680)	comGE	104597..104881 (+)	285	WP_265415091.1	competence type IV pilus minor pilin ComGE	-
ETT71_RS00685 (ETT71_00685)	comYF	104874..105308 (+)	435	WP_002992738.1	competence type IV pilus minor pilin ComGF	Machinery gene
ETT71_RS00690 (ETT71_00690)	comGG	105292..105618 (+)	327	WP_002986539.1	competence type IV pilus minor pilin ComGG	-
ETT71_RS00695 (ETT71_00695)	comYH	105716..106669 (+)	954	WP_136093597.1	class I SAM-dependent methyltransferase	Machinery gene
ETT71_RS00700 (ETT71_00700)	-	106728..107924 (+)	1197	WP_011284424.1	acetate kinase	-
ETT71_RS00705 (ETT71_00705)	-	108111..108419 (+)	309	WP_010921804.1	hypothetical protein	-
ETT71_RS00710 (ETT71_00710)	proC	108502..109272 (-)	771	WP_136022861.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16645.27 Da
• Isoelectric Point: 10.2526

>NTDB_id=341036 ETT71_RS00685 WP_002992738.1 104874..105308(+) (comYF) [Streptococcus pyogenes strain emmSTG866.1]
MSKQLSNIKAFTLLEALIALLVISGSLLVYQGLTQTLLKRSHYLARHDQDNWLLFSHQLREELSGARFYKVADNKLYVEK
GKKVLAFGQFKSHDFRKSASNGKGYQPMLFGISRSHIHIEQSQICITLKWKSGLERTFYYAFQD

Nucleotide

• Length: 435 bp

>NTDB_id=341036 ETT71_RS00685 WP_002992738.1 104874..105308(+) (comYF) [Streptococcus pyogenes strain emmSTG866.1]
TTGAGTAAACAATTAAGTAACATAAAAGCTTTTACTCTTCTAGAGGCGTTAATAGCCTTACTCGTGATATCAGGGTCTTT
ATTGGTTTATCAAGGTTTGACCCAAACCCTCCTTAAACGTAGCCATTATCTAGCCCGTCATGATCAAGACAATTGGCTCT
TATTTTCTCATCAATTGCGAGAGGAGTTAAGTGGAGCAAGATTTTACAAAGTAGCTGATAATAAACTATACGTTGAAAAA
GGAAAGAAAGTACTAGCTTTTGGCCAATTTAAAAGTCATGATTTCCGAAAATCAGCTAGTAATGGAAAAGGGTATCAACC
CATGTTATTTGGAATATCACGTAGTCATATTCACATAGAGCAGTCACAGATTTGCATTACTTTAAAGTGGAAAAGTGGGT
TAGAAAGGACTTTTTATTATGCCTTTCAAGACTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (41-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYF	Streptococcus mutans UA140	51.079	96.528	0.493
comYF	Streptococcus mutans UA159	50.36	96.528	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	46.715	95.139	0.444
comGF/cglF	Streptococcus mitis NCTC 12261	44.776	93.056	0.417
comGF/cglF	Streptococcus pneumoniae Rx1	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae D39	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae R6	43.609	92.361	0.403
comGF/cglF	Streptococcus pneumoniae TIGR4	43.609	92.361	0.403
comGF/cglF	Streptococcus mitis SK321	42.857	92.361	0.396