Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETL58_RS16520 Genome accession   NZ_CP035413
Coordinates   3143142..3145439 (-) Length   765 a.a.
NCBI ID   WP_032730345.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103629     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3138142..3150439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS16480 (ETL58_16480) mrpB 3138607..3139038 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ETL58_RS16485 (ETL58_16485) mrpC 3139038..3139379 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ETL58_RS16490 (ETL58_16490) mrpD 3139372..3140853 (+) 1482 WP_129010236.1 Na+/H+ antiporter subunit D -
  ETL58_RS16495 (ETL58_16495) mrpE 3140859..3141335 (+) 477 WP_029318490.1 Na+/H+ antiporter subunit E -
  ETL58_RS16500 (ETL58_16500) mrpF 3141335..3141619 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ETL58_RS16505 (ETL58_16505) mnhG 3141603..3141977 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ETL58_RS16510 (ETL58_16510) yuxO 3142018..3142398 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ETL58_RS16515 (ETL58_16515) comA 3142417..3143061 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ETL58_RS16520 (ETL58_16520) comP 3143142..3145439 (-) 2298 WP_032730345.1 histidine kinase Regulator
  ETL58_RS16525 (ETL58_16525) comX 3145447..3145608 (-) 162 WP_003228803.1 competence pheromone ComX -
  ETL58_RS16530 (ETL58_16530) - 3145623..3146483 (-) 861 WP_029318489.1 polyprenyl synthetase family protein -
  ETL58_RS16535 (ETL58_16535) degQ 3146668..3146808 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ETL58_RS16540 (ETL58_16540) - 3147030..3147155 (+) 126 WP_003228793.1 hypothetical protein -
  ETL58_RS16545 (ETL58_16545) - 3147269..3147637 (+) 369 WP_014477834.1 hypothetical protein -
  ETL58_RS16550 (ETL58_16550) pdeH 3147613..3148842 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88477.86 Da        Isoelectric Point: 7.9091

>NTDB_id=340819 ETL58_RS16520 WP_032730345.1 3143142..3145439(-) (comP) [Bacillus subtilis strain SRCM103629]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDDENVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=340819 ETL58_RS16520 WP_032730345.1 3143142..3145439(-) (comP) [Bacillus subtilis strain SRCM103629]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGTGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACCTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCCGCTTCTATTGCTTATATAAGT
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTCCGTTCACACCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCGTATGTCTTTTTAAATG
CGCACTATGTTTCATCTTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTATCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATCGAG
GAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTC
AAGGCGCTGTCGAAGTTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGAAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.326

100

0.599


Multiple sequence alignment