Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ETL58_RS12660 | Genome accession | NZ_CP035413 |
| Coordinates | 2443667..2444704 (-) | Length | 345 a.a. |
| NCBI ID | WP_101172386.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103629 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2438667..2449704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETL58_RS12610 (ETL58_12610) | tasA | 2438765..2439550 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| ETL58_RS12615 (ETL58_12615) | sipW | 2439614..2440186 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ETL58_RS12620 (ETL58_12620) | tapA | 2440170..2440931 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETL58_RS12625 (ETL58_12625) | yqzG | 2441203..2441529 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETL58_RS12630 (ETL58_12630) | spoIITA | 2441571..2441750 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ETL58_RS12635 (ETL58_12635) | comGG | 2441821..2442195 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| ETL58_RS12640 (ETL58_12640) | comGF | 2442196..2442579 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| ETL58_RS12645 (ETL58_12645) | comGE | 2442605..2442952 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| ETL58_RS12650 (ETL58_12650) | comGD | 2442936..2443367 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| ETL58_RS12655 (ETL58_12655) | comGC | 2443357..2443653 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ETL58_RS12660 (ETL58_12660) | comGB | 2443667..2444704 (-) | 1038 | WP_101172386.1 | comG operon protein ComGB | Machinery gene |
| ETL58_RS12665 (ETL58_12665) | comGA | 2444691..2445761 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| ETL58_RS12675 (ETL58_12675) | corA | 2446173..2447126 (-) | 954 | WP_029317911.1 | magnesium transporter CorA | - |
| ETL58_RS12680 (ETL58_12680) | yqhB | 2447269..2448597 (+) | 1329 | WP_041850018.1 | hemolysin family protein | - |
| ETL58_RS12685 (ETL58_12685) | rsbRD | 2448650..2449486 (-) | 837 | WP_129010211.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39646.10 Da Isoelectric Point: 9.7153
>NTDB_id=340803 ETL58_RS12660 WP_101172386.1 2443667..2444704(-) (comGB) [Bacillus subtilis strain SRCM103629]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=340803 ETL58_RS12660 WP_101172386.1 2443667..2444704(-) (comGB) [Bacillus subtilis strain SRCM103629]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |