Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ETK69_RS16560 Genome accession   NZ_CP035410
Coordinates   3267805..3268791 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103616     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3262805..3273791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK69_RS16525 (ETK69_16525) - 3263061..3263537 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  ETK69_RS16530 (ETK69_16530) - 3263537..3263821 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ETK69_RS16535 (ETK69_16535) mnhG 3263805..3264179 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ETK69_RS16540 (ETK69_16540) - 3264219..3264602 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ETK69_RS16545 (ETK69_16545) comA 3264624..3265268 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  ETK69_RS16550 (ETK69_16550) comP 3265349..3267652 (-) 2304 WP_070082286.1 histidine kinase Regulator
  ETK69_RS16555 (ETK69_16555) comX 3267672..3267851 (-) 180 WP_318010531.1 competence pheromone ComX -
  ETK69_RS16560 (ETK69_16560) comQ 3267805..3268791 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ETK69_RS16565 (ETK69_16565) degQ 3268922..3269062 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ETK69_RS16575 (ETK69_16575) - 3269527..3269868 (+) 342 WP_021495366.1 hypothetical protein -
  ETK69_RS16580 (ETK69_16580) - 3269875..3271098 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  ETK69_RS16585 (ETK69_16585) - 3271228..3272694 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  ETK69_RS16590 (ETK69_16590) - 3272712..3273263 (-) 552 WP_017419426.1 isochorismatase family cysteine hydrolase -
  ETK69_RS16595 (ETK69_16595) - 3273360..3273758 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=340661 ETK69_RS16560 WP_269321599.1 3267805..3268791(-) (comQ) [Bacillus velezensis strain SRCM103616]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=340661 ETK69_RS16560 WP_269321599.1 3267805..3268791(-) (comQ) [Bacillus velezensis strain SRCM103616]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54


Multiple sequence alignment