Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETK69_RS16550 Genome accession   NZ_CP035410
Coordinates   3265349..3267652 (-) Length   767 a.a.
NCBI ID   WP_070082286.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103616     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3260349..3272652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK69_RS16510 (ETK69_16510) - 3260809..3261240 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  ETK69_RS16515 (ETK69_16515) - 3261240..3261581 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  ETK69_RS16520 (ETK69_16520) - 3261574..3263055 (+) 1482 WP_128974217.1 Na+/H+ antiporter subunit D -
  ETK69_RS16525 (ETK69_16525) - 3263061..3263537 (+) 477 WP_129093768.1 Na+/H+ antiporter subunit E -
  ETK69_RS16530 (ETK69_16530) - 3263537..3263821 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ETK69_RS16535 (ETK69_16535) mnhG 3263805..3264179 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ETK69_RS16540 (ETK69_16540) - 3264219..3264602 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ETK69_RS16545 (ETK69_16545) comA 3264624..3265268 (-) 645 WP_129093769.1 response regulator transcription factor Regulator
  ETK69_RS16550 (ETK69_16550) comP 3265349..3267652 (-) 2304 WP_070082286.1 histidine kinase Regulator
  ETK69_RS16555 (ETK69_16555) comX 3267672..3267851 (-) 180 WP_318010531.1 competence pheromone ComX -
  ETK69_RS16560 (ETK69_16560) comQ 3267805..3268791 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ETK69_RS16565 (ETK69_16565) degQ 3268922..3269062 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ETK69_RS16575 (ETK69_16575) - 3269527..3269868 (+) 342 WP_021495366.1 hypothetical protein -
  ETK69_RS16580 (ETK69_16580) - 3269875..3271098 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 89000.47 Da        Isoelectric Point: 8.5629

>NTDB_id=340660 ETK69_RS16550 WP_070082286.1 3265349..3267652(-) (comP) [Bacillus velezensis strain SRCM103616]
MKKLIKPFTISIIILSVIYVCYVAFINMNGLIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=340660 ETK69_RS16550 WP_070082286.1 3265349..3267652(-) (comP) [Bacillus velezensis strain SRCM103616]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATGAATGGACTTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTACCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTACCTTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTACTTATCCCATTGGGATTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTGTGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGAGGAAGTTCTTATGTTTTGCTTTGTTTGTCTACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGTTCAAACCCGGTTTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGGTCGGATTTGGCCCGGGATCTGCATGATTCGGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACCCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGC
TGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(567-636)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.247

100

0.735


Multiple sequence alignment