Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   ETK61_RS19665 Genome accession   NZ_CP035406
Coordinates   3628578..3629735 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain SRCM103612     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3623578..3634735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK61_RS19635 (ETK61_19640) yvyF 3623831..3624250 (-) 420 WP_041351272.1 TIGR03826 family flagellar region protein -
  ETK61_RS19640 (ETK61_19645) comFC 3624324..3625046 (-) 723 WP_129137967.1 comF operon protein ComFC Machinery gene
  ETK61_RS19645 (ETK61_19650) comFB 3625010..3625306 (-) 297 WP_003227989.1 late competence protein ComFB -
  ETK61_RS19650 (ETK61_19655) comFA 3625366..3626757 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  ETK61_RS19655 (ETK61_19660) fakBA 3626863..3627708 (-) 846 WP_003244125.1 DegV family protein -
  ETK61_RS19660 (ETK61_19665) degU 3627806..3628495 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ETK61_RS19665 (ETK61_19670) degS 3628578..3629735 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  ETK61_RS19670 (ETK61_19675) yvyE 3629952..3630605 (+) 654 WP_121591204.1 YigZ family protein -
  ETK61_RS19675 (ETK61_19680) tagV 3630605..3631780 (+) 1176 WP_129137968.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  ETK61_RS19680 (ETK61_19685) tagO 3631853..3632929 (-) 1077 WP_043858787.1 MraY family glycosyltransferase -
  ETK61_RS19685 (ETK61_19690) tuaH 3633074..3634267 (-) 1194 WP_072557276.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=340592 ETK61_RS19665 WP_003227983.1 3628578..3629735(-) (degS) [Bacillus subtilis strain SRCM103612]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=340592 ETK61_RS19665 WP_003227983.1 3628578..3629735(-) (degS) [Bacillus subtilis strain SRCM103612]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment