Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ETK61_RS17425 Genome accession   NZ_CP035406
Coordinates   3195732..3198041 (-) Length   769 a.a.
NCBI ID   WP_129137873.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103612     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3190732..3203041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK61_RS17385 (ETK61_17390) mrpB 3191199..3191630 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ETK61_RS17390 (ETK61_17395) mrpC 3191630..3191971 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ETK61_RS17395 (ETK61_17400) mrpD 3191964..3193445 (+) 1482 WP_129137872.1 Na+/H+ antiporter subunit D -
  ETK61_RS17400 (ETK61_17405) mrpE 3193451..3193927 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ETK61_RS17405 (ETK61_17410) mrpF 3193927..3194211 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ETK61_RS17410 (ETK61_17415) mnhG 3194195..3194569 (+) 375 WP_041332992.1 monovalent cation/H(+) antiporter subunit G -
  ETK61_RS17415 (ETK61_17420) yuxO 3194608..3194988 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ETK61_RS17420 (ETK61_17425) comA 3195007..3195651 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ETK61_RS17425 (ETK61_17430) comP 3195732..3198041 (-) 2310 WP_129137873.1 two-component system sensor histidine kinase ComP Regulator
  ETK61_RS17430 (ETK61_17435) comX 3198056..3198223 (-) 168 WP_100505762.1 competence pheromone ComX Regulator
  ETK61_RS17435 (ETK61_17440) comQ 3198207..3199109 (-) 903 WP_129137874.1 polyprenyl synthetase family protein Regulator
  ETK61_RS17440 (ETK61_17445) degQ 3199294..3199434 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ETK61_RS17445 (ETK61_17450) - 3199656..3199781 (+) 126 WP_003228793.1 hypothetical protein -
  ETK61_RS17450 (ETK61_17455) - 3199895..3200263 (+) 369 WP_014477834.1 hypothetical protein -
  ETK61_RS17455 (ETK61_17460) pdeH 3200239..3201468 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89491.18 Da        Isoelectric Point: 8.6089

>NTDB_id=340583 ETK61_RS17425 WP_129137873.1 3195732..3198041(-) (comP) [Bacillus subtilis strain SRCM103612]
MKNLIKKFTLAVIVLSILYIFYITYITMNGIIIGTKVLKNDKSQFVIEEISESSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVNKIRRSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLREIGKAFLNRIYFLYIIPIFNLGIEFFRAYLQVDIDFLATVN
LVSFAILTLFAFSSIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFYVLPIIFTGNYVFPALVSASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLFIVGALVWLDVMKIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHLYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=340583 ETK61_RS17425 WP_129137873.1 3195732..3198041(-) (comP) [Bacillus subtilis strain SRCM103612]
TTGAAGAACTTAATAAAAAAATTCACATTAGCTGTAATTGTGTTGAGCATCCTCTATATATTCTATATAACTTATATAAC
AATGAATGGAATTATTATTGGAACTAAGGTTCTTAAAAATGATAAAAGTCAATTTGTGATAGAAGAAATATCAGAATCTT
CATATGGACAATTTGTTGGTTTGAGACAGGGAGATATCATATTAAAAATTAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACGCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAATAAAATAAGAAGATCATTTGCTGGTTATATTCTTATTCTATTGTTATTAGACATTTCTATT
GCTTATATAAGTGCAGGCGGACCATTTAGAGGACATAGAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATCCAAGGATATCTTAGAGAAATAGGAAAAGCTTTTTTGAATAGAATCTATTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTCCGAGCCTATTTACAAGTTGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCGATATTGACTCTATTTGCTTTTTCGTCGATATACTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTATTAATTTTAACAAACACTCTATCATTTGCTCCATTTTTGATATTTTATGTTCTTCCAATAA
TATTTACTGGTAATTATGTTTTCCCTGCATTAGTCTCTGCATCATTACTGGTACTTATTCCGTTTGGTTTAGTGTATCAA
TTTGTAGCGAATAAAATGTTTGATATAGAGTTTATTTTAGGAAGAATGAGATATTACGCTCTACTTGCTATGATACCAAC
TCTATTTATAGTTGGAGCATTAGTTTGGTTAGATGTAATGAAAATTCAGATGAACCCTGTGCGCCAAACGGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATCGGACCGGACTGGCATCTTTATCAAGAGGAGTTTGAAAATGTAACATCAGAAATCGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCCTTCTATACAAGTGTGTCCATGGAAAATGTTA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGGCTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

95.579

100

0.956


Multiple sequence alignment