Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ES969_RS19725 Genome accession   NZ_CP035402
Coordinates   3652700..3652819 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103576     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3647700..3657819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS19700 (ES969_19700) albG 3647868..3648569 (+) 702 WP_129134087.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ES969_RS19705 (ES969_19705) ywhL 3648575..3649951 (-) 1377 WP_069837831.1 YncE family protein -
  ES969_RS19710 (ES969_19710) ywhK 3649990..3651341 (-) 1352 Protein_3804 YncE family protein -
  ES969_RS22210 (ES969_19715) - 3651338..3651568 (-) 231 Protein_3805 hypothetical protein -
  ES969_RS19720 (ES969_19720) rapF 3651571..3652716 (+) 1146 WP_069837832.1 response regulator aspartate phosphatase RapF Regulator
  ES969_RS19725 (ES969_19725) phrF 3652700..3652819 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ES969_RS19730 (ES969_19730) - 3652917..3653344 (+) 428 Protein_3808 YbaK/EbsC family protein -
  ES969_RS19735 (ES969_19735) speB 3653409..3654281 (-) 873 WP_003227545.1 agmatinase -
  ES969_RS19740 (ES969_19740) speE 3654342..3655172 (-) 831 WP_003227543.1 spermidine synthase -
  ES969_RS19745 (ES969_19745) pbpG 3655374..3657449 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=340293 ES969_RS19725 WP_009968329.1 3652700..3652819(+) (phrF) [Bacillus subtilis strain SRCM103576]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=340293 ES969_RS19725 WP_009968329.1 3652700..3652819(+) (phrF) [Bacillus subtilis strain SRCM103576]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment