Detailed information NTG0340292

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES969_RS19720
• Genome accession: NZ_CP035402
• Coordinates: 3651571..3652716 (+)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103576
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3646571..3657716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES969_RS19695 (ES969_19695)	albF	3646591..3647871 (+)	1281	WP_017696258.1	pitrilysin family protein	-
ES969_RS19700 (ES969_19700)	albG	3647868..3648569 (+)	702	WP_129134087.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ES969_RS19705 (ES969_19705)	ywhL	3648575..3649951 (-)	1377	WP_069837831.1	YncE family protein	-
ES969_RS19710 (ES969_19710)	ywhK	3649990..3651341 (-)	1352	Protein_3804	YncE family protein	-
ES969_RS22210 (ES969_19715)	-	3651338..3651568 (-)	231	Protein_3805	hypothetical protein	-
ES969_RS19720 (ES969_19720)	rapF	3651571..3652716 (+)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
ES969_RS19725 (ES969_19725)	phrF	3652700..3652819 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ES969_RS19730 (ES969_19730)	-	3652917..3653344 (+)	428	Protein_3808	YbaK/EbsC family protein	-
ES969_RS19735 (ES969_19735)	speB	3653409..3654281 (-)	873	WP_003227545.1	agmatinase	-
ES969_RS19740 (ES969_19740)	speE	3654342..3655172 (-)	831	WP_003227543.1	spermidine synthase	-
ES969_RS19745 (ES969_19745)	pbpG	3655374..3657449 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=340292 ES969_RS19720 WP_069837832.1 3651571..3652716(+) (rapF) [Bacillus subtilis strain SRCM103576]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=340292 ES969_RS19720 WP_069837832.1 3651571..3652716(+) (rapF) [Bacillus subtilis strain SRCM103576]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57