Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ETA19_RS16355 Genome accession   NZ_CP035401
Coordinates   3123952..3124851 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain SRCM103837     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3118952..3129851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA19_RS16320 (ETA19_16320) mrpE 3119192..3119668 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ETA19_RS16325 (ETA19_16325) mrpF 3119668..3119952 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ETA19_RS16330 (ETA19_16330) mnhG 3119936..3120310 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  ETA19_RS16335 (ETA19_16335) yuxO 3120349..3120729 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ETA19_RS16340 (ETA19_16340) comA 3120748..3121392 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ETA19_RS16345 (ETA19_16345) comP 3121473..3123782 (-) 2310 WP_015251333.1 two-component system sensor histidine kinase ComP Regulator
  ETA19_RS16350 (ETA19_16350) comX 3123797..3123964 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  ETA19_RS16355 (ETA19_16355) comQ 3123952..3124851 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  ETA19_RS16360 (ETA19_16360) degQ 3125036..3125176 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ETA19_RS16365 (ETA19_16365) - 3125398..3125523 (+) 126 WP_003228793.1 hypothetical protein -
  ETA19_RS16370 (ETA19_16370) - 3125637..3126005 (+) 369 WP_128993338.1 hypothetical protein -
  ETA19_RS16375 (ETA19_16375) pdeH 3125981..3127210 (-) 1230 WP_128993339.1 cyclic di-GMP phosphodiesterase -
  ETA19_RS16380 (ETA19_16380) pncB 3127347..3128819 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ETA19_RS16385 (ETA19_16385) pncA 3128835..3129386 (-) 552 WP_015714627.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=340202 ETA19_RS16355 WP_003243039.1 3123952..3124851(-) (comQ) [Bacillus subtilis strain SRCM103837]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=340202 ETA19_RS16355 WP_003243039.1 3123952..3124851(-) (comQ) [Bacillus subtilis strain SRCM103837]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment