Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ETA18_RS19660 Genome accession   NZ_CP035400
Coordinates   3755672..3755791 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain SRCM103835     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3750672..3760791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS19635 (ETA18_19635) albG 3750836..3751537 (+) 702 WP_128993512.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ETA18_RS19640 (ETA18_19640) ywhL 3751543..3752919 (-) 1377 WP_128993513.1 YncE family protein -
  ETA18_RS19645 (ETA18_19645) ywhK 3752958..3754313 (-) 1356 WP_128993514.1 YncE family protein -
  ETA18_RS22025 (ETA18_19650) - 3754310..3754540 (-) 231 WP_041334639.1 hypothetical protein -
  ETA18_RS19655 (ETA18_19655) rapF 3754543..3755688 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  ETA18_RS19660 (ETA18_19660) phrF 3755672..3755791 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  ETA18_RS19665 (ETA18_19665) - 3755905..3756355 (+) 451 Protein_3795 YbaK/EbsC family protein -
  ETA18_RS19670 (ETA18_19670) speB 3756387..3757259 (-) 873 WP_003227545.1 agmatinase -
  ETA18_RS19675 (ETA18_19675) speE 3757320..3758150 (-) 831 WP_003227543.1 spermidine synthase -
  ETA18_RS19680 (ETA18_19680) pbpG 3758352..3760427 (+) 2076 WP_128993515.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=340133 ETA18_RS19660 WP_041334633.1 3755672..3755791(+) (phrF) [Bacillus subtilis strain SRCM103835]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=340133 ETA18_RS19660 WP_041334633.1 3755672..3755791(+) (phrF) [Bacillus subtilis strain SRCM103835]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment