Detailed information NTG0340132

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA18_RS19655
• Genome accession: NZ_CP035400
• Coordinates: 3754543..3755688 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103835
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3749543..3760688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA18_RS19630 (ETA18_19630)	albF	3749559..3750839 (+)	1281	WP_128993511.1	pitrilysin family protein	-
ETA18_RS19635 (ETA18_19635)	albG	3750836..3751537 (+)	702	WP_128993512.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ETA18_RS19640 (ETA18_19640)	ywhL	3751543..3752919 (-)	1377	WP_128993513.1	YncE family protein	-
ETA18_RS19645 (ETA18_19645)	ywhK	3752958..3754313 (-)	1356	WP_128993514.1	YncE family protein	-
ETA18_RS22025 (ETA18_19650)	-	3754310..3754540 (-)	231	WP_041334639.1	hypothetical protein	-
ETA18_RS19655 (ETA18_19655)	rapF	3754543..3755688 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
ETA18_RS19660 (ETA18_19660)	phrF	3755672..3755791 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ETA18_RS19665 (ETA18_19665)	-	3755905..3756355 (+)	451	Protein_3795	YbaK/EbsC family protein	-
ETA18_RS19670 (ETA18_19670)	speB	3756387..3757259 (-)	873	WP_003227545.1	agmatinase	-
ETA18_RS19675 (ETA18_19675)	speE	3757320..3758150 (-)	831	WP_003227543.1	spermidine synthase	-
ETA18_RS19680 (ETA18_19680)	pbpG	3758352..3760427 (+)	2076	WP_128993515.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=340132 ETA18_RS19655 WP_029318693.1 3754543..3755688(+) (rapF) [Bacillus subtilis strain SRCM103835]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=340132 ETA18_RS19655 WP_029318693.1 3754543..3755688(+) (rapF) [Bacillus subtilis strain SRCM103835]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572