Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ETA10_RS19700 Genome accession   NZ_CP035397
Coordinates   3659495..3659614 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103773     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3654495..3664614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS19675 (ETA10_19675) albG 3654658..3655359 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ETA10_RS19680 (ETA10_19680) ywhL 3655365..3656741 (-) 1377 WP_046381401.1 YncE family protein -
  ETA10_RS19685 (ETA10_19685) ywhK 3656781..3658136 (-) 1356 WP_129110589.1 YncE family protein -
  ETA10_RS22815 (ETA10_19690) - 3658133..3658363 (-) 231 Protein_3804 hypothetical protein -
  ETA10_RS19695 (ETA10_19695) rapF 3658366..3659511 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  ETA10_RS19700 (ETA10_19700) phrF 3659495..3659614 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ETA10_RS19705 (ETA10_19705) ywhH 3659712..3660185 (+) 474 Protein_3807 YbaK/EbsC family protein -
  ETA10_RS19710 (ETA10_19710) speB 3660216..3661088 (-) 873 WP_003227545.1 agmatinase -
  ETA10_RS19715 (ETA10_19715) speE 3661149..3661979 (-) 831 WP_003227543.1 spermidine synthase -
  ETA10_RS19720 (ETA10_19720) pbpG 3662182..3664257 (+) 2076 WP_029726084.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=339976 ETA10_RS19700 WP_009968329.1 3659495..3659614(+) (phrF) [Bacillus subtilis strain SRCM103773]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=339976 ETA10_RS19700 WP_009968329.1 3659495..3659614(+) (phrF) [Bacillus subtilis strain SRCM103773]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment