Detailed information NTG0339975

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA10_RS19695
• Genome accession: NZ_CP035397
• Coordinates: 3658366..3659511 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103773
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3653366..3664511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA10_RS19670 (ETA10_19670)	albF	3653381..3654661 (+)	1281	WP_046381400.1	pitrilysin family protein	-
ETA10_RS19675 (ETA10_19675)	albG	3654658..3655359 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ETA10_RS19680 (ETA10_19680)	ywhL	3655365..3656741 (-)	1377	WP_046381401.1	YncE family protein	-
ETA10_RS19685 (ETA10_19685)	ywhK	3656781..3658136 (-)	1356	WP_129110589.1	YncE family protein	-
ETA10_RS22815 (ETA10_19690)	-	3658133..3658363 (-)	231	Protein_3804	hypothetical protein	-
ETA10_RS19695 (ETA10_19695)	rapF	3658366..3659511 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
ETA10_RS19700 (ETA10_19700)	phrF	3659495..3659614 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ETA10_RS19705 (ETA10_19705)	ywhH	3659712..3660185 (+)	474	Protein_3807	YbaK/EbsC family protein	-
ETA10_RS19710 (ETA10_19710)	speB	3660216..3661088 (-)	873	WP_003227545.1	agmatinase	-
ETA10_RS19715 (ETA10_19715)	speE	3661149..3661979 (-)	831	WP_003227543.1	spermidine synthase	-
ETA10_RS19720 (ETA10_19720)	pbpG	3662182..3664257 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=339975 ETA10_RS19695 WP_021480843.1 3658366..3659511(+) (rapF) [Bacillus subtilis strain SRCM103773]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=339975 ETA10_RS19695 WP_021480843.1 3658366..3659511(+) (rapF) [Bacillus subtilis strain SRCM103773]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572