Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ES968_RS19805 Genome accession   NZ_CP035395
Coordinates   3698066..3698185 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103697     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3693066..3703185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS19780 (ES968_19780) albG 3693230..3693931 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ES968_RS19785 (ES968_19785) ywhL 3693937..3695313 (-) 1377 WP_014481223.1 YncE family protein -
  ES968_RS19790 (ES968_19790) ywhK 3695352..3696707 (-) 1356 WP_049140945.1 YncE family protein -
  ES968_RS23095 (ES968_19795) - 3696704..3696934 (-) 231 Protein_3833 hypothetical protein -
  ES968_RS19800 (ES968_19800) rapF 3696937..3698082 (+) 1146 WP_021480843.1 response regulator aspartate phosphatase RapF Regulator
  ES968_RS19805 (ES968_19805) phrF 3698066..3698185 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ES968_RS19810 (ES968_19810) ywhH 3698283..3698756 (+) 474 Protein_3836 YbaK/EbsC family protein -
  ES968_RS19815 (ES968_19815) speB 3698787..3699659 (-) 873 WP_003227545.1 agmatinase -
  ES968_RS19820 (ES968_19820) speE 3699720..3700550 (-) 831 WP_003227543.1 spermidine synthase -
  ES968_RS19825 (ES968_19825) pbpG 3700753..3702828 (+) 2076 WP_129134415.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=339897 ES968_RS19805 WP_009968329.1 3698066..3698185(+) (phrF) [Bacillus subtilis strain SRCM103697]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=339897 ES968_RS19805 WP_009968329.1 3698066..3698185(+) (phrF) [Bacillus subtilis strain SRCM103697]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment