Detailed information NTG0339896

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES968_RS19800
• Genome accession: NZ_CP035395
• Coordinates: 3696937..3698082 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103697
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3691937..3703082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES968_RS19775 (ES968_19775)	albF	3691953..3693233 (+)	1281	WP_017696258.1	pitrilysin family protein	-
ES968_RS19780 (ES968_19780)	albG	3693230..3693931 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ES968_RS19785 (ES968_19785)	ywhL	3693937..3695313 (-)	1377	WP_014481223.1	YncE family protein	-
ES968_RS19790 (ES968_19790)	ywhK	3695352..3696707 (-)	1356	WP_049140945.1	YncE family protein	-
ES968_RS23095 (ES968_19795)	-	3696704..3696934 (-)	231	Protein_3833	hypothetical protein	-
ES968_RS19800 (ES968_19800)	rapF	3696937..3698082 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
ES968_RS19805 (ES968_19805)	phrF	3698066..3698185 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ES968_RS19810 (ES968_19810)	ywhH	3698283..3698756 (+)	474	Protein_3836	YbaK/EbsC family protein	-
ES968_RS19815 (ES968_19815)	speB	3698787..3699659 (-)	873	WP_003227545.1	agmatinase	-
ES968_RS19820 (ES968_19820)	speE	3699720..3700550 (-)	831	WP_003227543.1	spermidine synthase	-
ES968_RS19825 (ES968_19825)	pbpG	3700753..3702828 (+)	2076	WP_129134415.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=339896 ES968_RS19800 WP_021480843.1 3696937..3698082(+) (rapF) [Bacillus subtilis strain SRCM103697]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=339896 ES968_RS19800 WP_021480843.1 3696937..3698082(+) (rapF) [Bacillus subtilis strain SRCM103697]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572