Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ES967_RS19110 Genome accession   NZ_CP035394
Coordinates   3670664..3670783 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain SRCM103696     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3665664..3675783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES967_RS19085 (ES967_19085) albG 3665828..3666529 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  ES967_RS19090 (ES967_19090) ywhL 3666535..3667911 (-) 1377 WP_110109508.1 YncE family protein -
  ES967_RS19095 (ES967_19095) ywhK 3667950..3669305 (-) 1356 WP_015250986.1 YncE family protein -
  ES967_RS21295 (ES967_19100) - 3669302..3669532 (-) 231 WP_024572000.1 hypothetical protein -
  ES967_RS19105 (ES967_19105) rapF 3669535..3670680 (+) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  ES967_RS19110 (ES967_19110) phrF 3670664..3670783 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  ES967_RS19115 (ES967_19115) - 3670881..3671343 (+) 463 Protein_3677 YbaK/EbsC family protein -
  ES967_RS19120 (ES967_19120) speB 3671375..3672247 (-) 873 WP_003227545.1 agmatinase -
  ES967_RS19125 (ES967_19125) speE 3672308..3673138 (-) 831 WP_003227543.1 spermidine synthase -
  ES967_RS19130 (ES967_19130) pbpG 3673340..3675415 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=339818 ES967_RS19110 WP_041334633.1 3670664..3670783(+) (phrF) [Bacillus subtilis strain SRCM103696]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=339818 ES967_RS19110 WP_041334633.1 3670664..3670783(+) (phrF) [Bacillus subtilis strain SRCM103696]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment