Detailed information NTG0339817

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES967_RS19105
• Genome accession: NZ_CP035394
• Coordinates: 3669535..3670680 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103696
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3664535..3675680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES967_RS19080 (ES967_19080)	albF	3664551..3665831 (+)	1281	WP_003242974.1	pitrilysin family protein	-
ES967_RS19085 (ES967_19085)	albG	3665828..3666529 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ES967_RS19090 (ES967_19090)	ywhL	3666535..3667911 (-)	1377	WP_110109508.1	YncE family protein	-
ES967_RS19095 (ES967_19095)	ywhK	3667950..3669305 (-)	1356	WP_015250986.1	YncE family protein	-
ES967_RS21295 (ES967_19100)	-	3669302..3669532 (-)	231	WP_024572000.1	hypothetical protein	-
ES967_RS19105 (ES967_19105)	rapF	3669535..3670680 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
ES967_RS19110 (ES967_19110)	phrF	3670664..3670783 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ES967_RS19115 (ES967_19115)	-	3670881..3671343 (+)	463	Protein_3677	YbaK/EbsC family protein	-
ES967_RS19120 (ES967_19120)	speB	3671375..3672247 (-)	873	WP_003227545.1	agmatinase	-
ES967_RS19125 (ES967_19125)	speE	3672308..3673138 (-)	831	WP_003227543.1	spermidine synthase	-
ES967_RS19130 (ES967_19130)	pbpG	3673340..3675415 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=339817 ES967_RS19105 WP_086344441.1 3669535..3670680(+) (rapF) [Bacillus subtilis strain SRCM103696]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=339817 ES967_RS19105 WP_086344441.1 3669535..3670680(+) (rapF) [Bacillus subtilis strain SRCM103696]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572