Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ES963_RS12845 | Genome accession | NZ_CP035390 |
| Coordinates | 2386527..2386862 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103641 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2381527..2391862
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES963_RS12825 (ES963_12825) | gcvT | 2382119..2383207 (-) | 1089 | WP_014480247.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ES963_RS12830 (ES963_12830) | hepAA | 2383649..2385322 (+) | 1674 | WP_014480248.1 | SNF2-related protein | - |
| ES963_RS12835 (ES963_12835) | yqhG | 2385343..2386137 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| ES963_RS12840 (ES963_12840) | sinI | 2386320..2386493 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ES963_RS12845 (ES963_12845) | sinR | 2386527..2386862 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ES963_RS12850 (ES963_12850) | tasA | 2386955..2387740 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| ES963_RS12855 (ES963_12855) | sipW | 2387804..2388376 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ES963_RS12860 (ES963_12860) | tapA | 2388360..2389121 (-) | 762 | WP_087614619.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES963_RS12865 (ES963_12865) | yqzG | 2389393..2389719 (+) | 327 | WP_029317915.1 | YqzG/YhdC family protein | - |
| ES963_RS12870 (ES963_12870) | spoIITA | 2389761..2389940 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| ES963_RS12875 (ES963_12875) | comGG | 2390011..2390385 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| ES963_RS12880 (ES963_12880) | comGF | 2390386..2390769 (-) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| ES963_RS12885 (ES963_12885) | comGE | 2390795..2391142 (-) | 348 | WP_087614620.1 | ComG operon protein 5 | Machinery gene |
| ES963_RS12890 (ES963_12890) | comGD | 2391126..2391557 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| ES963_RS12895 (ES963_12895) | comGC | 2391547..2391843 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=339542 ES963_RS12845 WP_003226345.1 2386527..2386862(+) (sinR) [Bacillus subtilis strain SRCM103641]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=339542 ES963_RS12845 WP_003226345.1 2386527..2386862(+) (sinR) [Bacillus subtilis strain SRCM103641]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |