Detailed information NTG0339158

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ESP48_RS02325
• Genome accession: NZ_CP035306
• Coordinates: 433584..434510 (-)
• Length: 308 a.a.
• NCBI ID: WP_064355560.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain IDCC2201
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 428584..439510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ESP48_RS02295 (ESP48_02295)	-	428661..429455 (-)	795	WP_064355552.1	HAD-IIB family hydrolase	-
ESP48_RS02300 (ESP48_02300)	-	429640..430017 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
ESP48_RS02305 (ESP48_02305)	-	430022..430720 (+)	699	WP_064355553.1	ABC transporter ATP-binding protein	-
ESP48_RS02310 (ESP48_02310)	-	430732..431517 (+)	786	WP_011681414.1	hypothetical protein	-
ESP48_RS02315 (ESP48_02315)	amiF	431567..432496 (-)	930	WP_064355555.1	ATP-binding cassette domain-containing protein	Regulator
ESP48_RS02320 (ESP48_02320)	amiE	432489..433574 (-)	1086	WP_064355558.1	ABC transporter ATP-binding protein	Regulator
ESP48_RS02325 (ESP48_02325)	amiD	433584..434510 (-)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
ESP48_RS02330 (ESP48_02330)	amiC	434510..436003 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
ESP48_RS02335 (ESP48_02335)	amiA3	436064..438034 (-)	1971	WP_064355565.1	peptide ABC transporter substrate-binding protein	Regulator
ESP48_RS02340 (ESP48_02340)	-	438270..438460 (-)	191	Protein_441	IS3 family transposase	-
ESP48_RS10595	-	438451..438863 (-)	413	Protein_442	ATP-binding cassette domain-containing protein	-
ESP48_RS10600 (ESP48_02355)	-	438895..439209 (-)	315	Protein_443	TatD family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34650.80 Da
• Isoelectric Point: 9.7054

>NTDB_id=339158 ESP48_RS02325 WP_064355560.1 433584..434510(-) (amiD) [Streptococcus thermophilus strain IDCC2201]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=339158 ESP48_RS02325 WP_064355560.1 433584..434510(-) (amiD) [Streptococcus thermophilus strain IDCC2201]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATCATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.351	100	0.994
amiD	Streptococcus thermophilus LMD-9	99.351	100	0.994
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964