Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ESP48_RS02320 Genome accession   NZ_CP035306
Coordinates   432489..433574 (-) Length   361 a.a.
NCBI ID   WP_064355558.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain IDCC2201     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 427489..438574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ESP48_RS02290 (ESP48_02290) - 427853..428668 (-) 816 WP_024010001.1 Cof-type HAD-IIB family hydrolase -
  ESP48_RS02295 (ESP48_02295) - 428661..429455 (-) 795 WP_064355552.1 HAD-IIB family hydrolase -
  ESP48_RS02300 (ESP48_02300) - 429640..430017 (+) 378 WP_011681413.1 GntR family transcriptional regulator -
  ESP48_RS02305 (ESP48_02305) - 430022..430720 (+) 699 WP_064355553.1 ABC transporter ATP-binding protein -
  ESP48_RS02310 (ESP48_02310) - 430732..431517 (+) 786 WP_011681414.1 hypothetical protein -
  ESP48_RS02315 (ESP48_02315) amiF 431567..432496 (-) 930 WP_064355555.1 ATP-binding cassette domain-containing protein Regulator
  ESP48_RS02320 (ESP48_02320) amiE 432489..433574 (-) 1086 WP_064355558.1 ABC transporter ATP-binding protein Regulator
  ESP48_RS02325 (ESP48_02325) amiD 433584..434510 (-) 927 WP_064355560.1 oligopeptide ABC transporter permease OppC Regulator
  ESP48_RS02330 (ESP48_02330) amiC 434510..436003 (-) 1494 WP_064355564.1 ABC transporter permease Regulator
  ESP48_RS02335 (ESP48_02335) amiA3 436064..438034 (-) 1971 WP_064355565.1 peptide ABC transporter substrate-binding protein Regulator
  ESP48_RS02340 (ESP48_02340) - 438270..438460 (-) 191 Protein_441 IS3 family transposase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39908.63 Da        Isoelectric Point: 4.6920

>NTDB_id=339157 ESP48_RS02320 WP_064355558.1 432489..433574(-) (amiE) [Streptococcus thermophilus strain IDCC2201]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=339157 ESP48_RS02320 WP_064355558.1 432489..433574(-) (amiE) [Streptococcus thermophilus strain IDCC2201]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus thermophilus LMG 18311

100

99.723

0.997

  amiE Streptococcus thermophilus LMD-9

100

99.723

0.997

  amiE Streptococcus salivarius strain HSISS4

96.944

99.723

0.967

  oppD Streptococcus mutans UA159

54.441

96.676

0.526


Multiple sequence alignment