Detailed information NTG0339057

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: EO087_RS10180
• Genome accession: NZ_CP035300
• Coordinates: 2177049..2178485 (+)
• Length: 478 a.a.
• NCBI ID: WP_128898771.1
• Uniprot ID: A0A410UJF7
• Organism: Dyella sp. M7H15-1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2172049..2183485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EO087_RS10170 (EO087_10170)	-	2172219..2173823 (+)	1605	WP_128898770.1	HAMP domain-containing sensor histidine kinase	-
EO087_RS10175 (EO087_10175)	pgmB	2173836..2176901 (+)	3066	WP_240669017.1	beta-phosphoglucomutase	-
EO087_RS10180 (EO087_10180)	pilR	2177049..2178485 (+)	1437	WP_128898771.1	sigma-54 dependent transcriptional regulator	Regulator
EO087_RS10185 (EO087_10185)	-	2178518..2180095 (-)	1578	WP_205744344.1	response regulator	-
EO087_RS10190 (EO087_10190)	-	2180214..2180660 (-)	447	WP_128898772.1	response regulator	-
EO087_RS10195 (EO087_10195)	-	2180672..2182453 (-)	1782	WP_343132817.1	ATP-binding protein	-

Sequence

Protein

• Length: 478 a.a.
• Molecular weight: 52178.63 Da
• Isoelectric Point: 6.5095

>NTDB_id=339057 EO087_RS10180 WP_128898771.1 2177049..2178485(+) (pilR) [Dyella sp. M7H15-1]
MSQQTVLVIDDERDIRELLTITLGRMDLKVHAVGTVAEAQSALAEHHYDLCFTDMRLPDGSGQEVIELIAADYDDTPVAM
ITAYGNVDAAVTALKAGAFDFVSKPVDIQMLRRLVRTALKLAEEKRTGTSPSSVATGSSSRLIGDSPIMQQVRGTIGKLA
RNQAPVYIAGESGVGKELVARLIHEQGPRATGPFVPVNCGAIPSELMESEFFGHHKGSFTGAVADKEGLFQAAHGGTLFL
DEVAELPLHMQVKLLRAIQEKAVRPIGAREEIAVDVRILSATHKNLASLVDQGQFRQDLFYRINVIELRVPPLRERRGDV
PLLTDFVLRQLAIKSKSDTPTRLLPEARQALEEYDFPGNVRELENILERSVAMCDGDRIDASDLMLPQRPPRHGTEALAA
AAANAHHTPPGHAHTPIAASPAQTSSSELGLDDYISNLERTAIMKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1437 bp

>NTDB_id=339057 EO087_RS10180 WP_128898771.1 2177049..2178485(+) (pilR) [Dyella sp. M7H15-1]
ATGAGCCAACAGACCGTACTGGTCATCGACGATGAACGCGACATCCGCGAACTGTTGACTATCACGCTAGGCCGCATGGA
CCTGAAGGTCCATGCCGTCGGTACAGTGGCCGAGGCGCAAAGCGCCCTGGCCGAGCACCACTACGATCTGTGCTTTACCG
ATATGCGCCTTCCTGACGGCAGCGGCCAGGAAGTCATCGAGCTGATTGCCGCCGATTACGACGACACGCCGGTAGCGATG
ATCACCGCCTACGGCAACGTCGACGCCGCGGTGACCGCATTGAAGGCCGGCGCCTTCGACTTCGTATCCAAGCCGGTCGA
CATCCAGATGTTGCGACGGCTGGTGCGCACAGCACTGAAACTCGCCGAGGAAAAGCGCACCGGCACCAGCCCCAGCAGCG
TAGCCACTGGCTCCAGCTCCCGCCTGATCGGCGACTCGCCCATCATGCAACAGGTGCGCGGCACCATCGGCAAACTGGCA
CGCAACCAGGCCCCGGTGTACATCGCCGGCGAATCGGGCGTGGGCAAGGAACTGGTCGCACGACTGATCCACGAGCAGGG
ACCGCGTGCCACGGGTCCGTTTGTGCCGGTCAACTGCGGCGCCATTCCTTCCGAGTTGATGGAAAGCGAATTCTTCGGCC
ACCACAAAGGCAGCTTCACCGGCGCCGTGGCCGACAAGGAGGGCCTGTTCCAGGCCGCCCACGGCGGCACACTATTCCTG
GATGAAGTGGCCGAGCTGCCGCTGCATATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGGCGGTGCGCCCGATCGG
CGCCCGCGAGGAAATCGCCGTCGACGTGCGCATCCTGTCGGCCACGCACAAGAACCTTGCCTCGCTGGTCGACCAGGGAC
AGTTCCGCCAAGACTTGTTCTATCGCATCAACGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAGCGCCGTGGCGACGTA
CCGTTGCTGACTGACTTCGTGCTGCGCCAGTTGGCCATCAAAAGCAAGAGCGACACGCCGACCCGCCTGCTACCAGAAGC
CCGCCAGGCACTGGAAGAATACGACTTCCCCGGTAATGTGCGCGAATTGGAAAACATCCTCGAACGCTCCGTGGCGATGT
GCGATGGCGATCGCATCGATGCCAGCGACCTGATGCTACCGCAACGTCCACCACGCCATGGCACGGAAGCACTTGCCGCC
GCTGCCGCCAATGCCCATCACACACCGCCTGGCCACGCGCACACGCCCATCGCCGCATCACCGGCACAAACCTCATCCAG
CGAGCTGGGATTGGACGACTACATCAGCAATCTTGAGCGCACCGCGATCATGAAAGCGTTGGAAGAGTCGCGCTACAACA
AGACAGCAGCGGCACGGAAGCTGGGCATTACCTTCCGTGCATTGCGCTACAAGCTGAAGAAACTCGGGATCGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (436-475)

• Sigma-54 interaction domain (Sigma54_activat) (142-308)

3D structure

• AlphaFold DB: A0A410UJF7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	58.714	100	0.592
pilR	Acinetobacter baumannii strain A118	48.218	99.791	0.481