Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EQM06_RS05800 Genome accession   NZ_CP035281
Coordinates   1274354..1276114 (+) Length   586 a.a.
NCBI ID   WP_128745431.1    Uniprot ID   A0A410PV07
Organism   Aminipila luticellarii strain JN-18     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1269354..1281114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQM06_RS05775 (EQM06_05775) - 1270196..1270975 (+) 780 WP_128745426.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  EQM06_RS05780 (EQM06_05780) - 1270977..1271819 (+) 843 WP_128745427.1 glycosyltransferase -
  EQM06_RS05785 (EQM06_05785) - 1271816..1272778 (+) 963 WP_128745428.1 glycosyltransferase family 8 protein -
  EQM06_RS05790 (EQM06_05790) - 1272775..1273698 (+) 924 WP_128745429.1 lysophospholipid acyltransferase family protein -
  EQM06_RS05795 (EQM06_05795) - 1273802..1274242 (+) 441 WP_128745430.1 MarR family winged helix-turn-helix transcriptional regulator -
  EQM06_RS05800 (EQM06_05800) rcrP 1274354..1276114 (+) 1761 WP_128745431.1 ABC transporter ATP-binding protein Regulator
  EQM06_RS05805 (EQM06_05805) rcrQ 1276111..1277958 (+) 1848 WP_128745432.1 ABC transporter ATP-binding protein Regulator
  EQM06_RS05810 (EQM06_05810) - 1278103..1279587 (+) 1485 WP_128745433.1 NAD(P)/FAD-dependent oxidoreductase -
  EQM06_RS05815 (EQM06_05815) - 1279687..1280505 (+) 819 WP_330548373.1 pirin family protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64638.98 Da        Isoelectric Point: 4.9353

>NTDB_id=338871 EQM06_RS05800 WP_128745431.1 1274354..1276114(+) (rcrP) [Aminipila luticellarii strain JN-18]
MLKIFKYFRSNEWIQAAVSLVFIVTQVWLDLKLPDYMADITRLVQTPGSAMSDIWEQGGYMLLCALGSVVSAVIVGFFAA
RIAASFAQRLRSMLFAKVDSFSMEEINRFSTSSLITRSTNDITQLQILVTMGLQLIVKAPIMAVWAIMKIAGKGFEWSMA
TGAAVLILIVMIACIMAFVIPKFKKMQTLTDNLNQVTRENLTGLRVVRAYNAESYQEEKFEQANEELTGTQLFTSRSMSA
MMPVMSMVMSGLSLAIYWIGAYLIDGAQALDKLTIFSNMVVFSSYAVQVIMSFMMLVMMFILMPRASVSAKRINEVLDTE
PTITDGSLTEGQPGLVGEVEFKHVSFKYPDAEEYVLQDVSFSVKHGETIAFIGSTGSGKSTLINLVPRFFDATEGEVLID
GVNVKNYKGEALYNKIGYVPQKSVLFRGSVSSNVAYGENGKEPAPAEQIEKAVAIAQGTEFVEAMEDGYYAEISQGGTNV
SGGQKQRLAIARAVCRNPEIYIFDDSFSALDYKTDRVLRNALKKETAGVTSMIVAQRIGTIMDADQIVVLDEGKMVGKGT
HKELLETCRIYKEIATSQLSEEELAS

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=338871 EQM06_RS05800 WP_128745431.1 1274354..1276114(+) (rcrP) [Aminipila luticellarii strain JN-18]
ATGCTTAAAATTTTTAAATATTTTAGATCAAACGAATGGATACAGGCAGCTGTCAGTCTGGTGTTCATTGTCACGCAGGT
CTGGCTGGATTTAAAACTGCCGGATTATATGGCGGATATTACAAGGCTGGTGCAGACGCCCGGCAGCGCCATGAGCGATA
TTTGGGAGCAGGGGGGATATATGCTCCTGTGCGCCCTAGGCAGTGTAGTTTCAGCGGTCATCGTTGGATTTTTTGCGGCT
CGTATTGCTGCATCTTTCGCACAACGCCTCCGCAGCATGTTGTTTGCTAAGGTGGATTCCTTTTCAATGGAGGAAATCAA
CCGGTTTTCTACTTCAAGTTTAATTACGCGGTCTACAAATGACATTACGCAGCTTCAGATTTTGGTCACCATGGGGCTGC
AATTAATTGTTAAGGCACCTATTATGGCTGTTTGGGCCATCATGAAAATTGCAGGAAAGGGTTTTGAATGGTCTATGGCT
ACCGGGGCCGCAGTGTTGATTTTGATCGTTATGATTGCATGTATCATGGCCTTTGTTATTCCAAAATTCAAAAAAATGCA
GACATTGACAGACAATTTGAATCAGGTGACAAGAGAAAACTTAACAGGGCTTCGGGTGGTTCGTGCGTATAATGCGGAAT
CTTATCAAGAAGAAAAATTTGAGCAGGCTAATGAGGAATTGACTGGAACACAGCTTTTTACCAGCCGAAGTATGTCTGCC
ATGATGCCGGTGATGAGCATGGTCATGAGCGGGCTGTCTCTGGCAATTTATTGGATTGGCGCGTACTTAATCGATGGTGC
TCAGGCACTGGACAAGCTGACTATTTTCTCAAATATGGTGGTATTTTCTTCTTATGCCGTGCAGGTCATTATGTCCTTTA
TGATGCTAGTCATGATGTTTATCCTGATGCCGAGAGCATCTGTATCAGCTAAGCGTATCAATGAGGTGCTGGATACTGAG
CCAACTATTACAGATGGTTCGCTGACTGAAGGGCAGCCCGGACTTGTGGGCGAGGTTGAATTTAAACATGTCAGCTTTAA
ATATCCGGATGCGGAGGAATATGTGCTGCAAGATGTGAGCTTTTCTGTAAAGCACGGGGAAACCATAGCATTTATCGGTT
CCACCGGCAGCGGCAAGAGTACCCTGATCAATCTGGTTCCCCGTTTCTTTGATGCTACGGAAGGAGAAGTGCTGATTGAC
GGTGTCAATGTAAAGAACTATAAAGGGGAAGCTTTATATAATAAAATCGGTTATGTTCCGCAAAAATCGGTCTTATTCCG
GGGAAGCGTCAGCTCTAATGTTGCTTATGGCGAAAACGGAAAAGAGCCTGCTCCGGCAGAGCAGATCGAAAAAGCAGTTG
CTATTGCTCAAGGCACAGAGTTCGTAGAAGCCATGGAAGACGGATATTATGCAGAAATTTCTCAAGGCGGTACCAACGTA
TCGGGCGGTCAGAAGCAGCGGCTTGCCATTGCCCGTGCGGTCTGTCGAAATCCGGAAATCTACATTTTTGATGACAGCTT
TTCCGCCTTAGATTACAAAACCGATCGGGTGCTGCGAAATGCTTTAAAGAAAGAAACGGCAGGAGTCACCAGTATGATTG
TTGCACAACGCATCGGAACCATTATGGATGCCGATCAGATCGTGGTACTGGATGAAGGAAAAATGGTAGGAAAGGGTACG
CACAAAGAGCTGCTCGAAACCTGCCGGATCTATAAAGAAATTGCGACATCACAGCTTAGTGAGGAGGAACTTGCGTCATG
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(58-292)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A410PV07

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

55.444

100

0.565

Multiple sequence alignment