Detailed information NTG0338364

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F0316_RS04695
• Genome accession: NZ_CP043554
• Coordinates: 977244..978101 (+)
• Length: 285 a.a.
• NCBI ID: WP_149560246.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain RFB16
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 972244..983101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0316_RS04680 (F0316_04680)	-	973064..974086 (+)	1023	WP_001908563.1	ABC transporter permease	-
F0316_RS04685 (F0316_04685)	-	974086..975129 (+)	1044	WP_000628718.1	ABC transporter permease	-
F0316_RS04690 (F0316_04690)	-	975156..976079 (+)	924	Protein_865	ABC transporter substrate-binding protein	-
F0316_RS04695 (F0316_04695)	amiE	977244..978101 (+)	858	WP_149560246.1	ABC transporter ATP-binding protein	Regulator
F0316_RS04700 (F0316_04700)	-	978104..978925 (+)	822	WP_001182758.1	ABC transporter ATP-binding protein	-
F0316_RS04705 (F0316_04705)	-	979118..979978 (+)	861	WP_001908559.1	membrane protein	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31559.00 Da
• Isoelectric Point: 6.7610

>NTDB_id=338364 F0316_RS04695 WP_149560246.1 977244..978101(+) (amiE) [Vibrio cholerae strain RFB16]
MGIPWQNPSIPCQKADNGAVKILHGVSFDVKKGRTLGLVGESGCGKSVTAMSIMGLLPKPYGRVTGGEILYRGKDLVKLP
PKEMYAMRGDRISIIFQDPMTALNPVHTVGKQLMEVLALHRPELGRSTLRQHASEMLEKVRIPMADKRLDEYPHNLSGGM
RQRVMIAMALACKPEILICDEPTTALDVTVQASILDLIQDLQQETGMAVIFITHDLGVVAEVCDEVVVMYAGKVVEHADV
FDLFDRPQHPYTERLMSLMPSLEHTPKQLIPIKPIDPQSFPEFKG

Nucleotide

• Length: 858 bp

>NTDB_id=338364 F0316_RS04695 WP_149560246.1 977244..978101(+) (amiE) [Vibrio cholerae strain RFB16]
ATCGGCATACCATGGCAGAACCCCTCAATCCCCTGTCAAAAAGCTGATAACGGAGCGGTAAAAATTCTGCATGGAGTGAG
CTTTGACGTCAAAAAAGGTCGAACACTTGGTTTAGTGGGTGAATCGGGTTGTGGGAAAAGCGTCACCGCAATGTCAATCA
TGGGATTATTGCCGAAACCCTATGGCCGAGTGACTGGTGGAGAGATCCTATATCGCGGAAAAGATTTGGTGAAACTACCA
CCCAAAGAGATGTATGCGATGCGTGGTGATCGTATCTCAATCATTTTTCAGGATCCGATGACAGCGCTTAATCCTGTTCA
TACCGTGGGTAAACAACTGATGGAAGTTCTGGCCTTACATAGGCCAGAGCTTGGTCGTTCTACTTTGCGTCAACACGCAT
CAGAGATGCTCGAAAAAGTGCGAATTCCGATGGCAGACAAGCGTTTGGATGAGTATCCGCATAACCTTTCTGGAGGGATG
CGACAACGAGTGATGATCGCGATGGCATTAGCATGTAAACCGGAAATATTGATCTGTGATGAACCCACTACGGCATTAGA
CGTCACGGTACAAGCCTCCATTTTGGATTTGATCCAAGATTTGCAACAAGAAACAGGCATGGCAGTGATCTTTATTACCC
ATGATTTAGGCGTAGTGGCTGAAGTGTGTGATGAAGTCGTGGTGATGTATGCAGGTAAAGTGGTTGAGCATGCAGACGTT
TTTGATCTGTTTGATCGCCCGCAGCACCCATATACCGAAAGATTAATGAGTTTAATGCCCAGTTTAGAGCACACGCCTAA
ACAGTTGATCCCTATTAAACCGATTGATCCACAGTCATTTCCTGAGTTTAAGGGGTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (23-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	51.793	88.07	0.456
amiE	Streptococcus thermophilus LMD-9	51.793	88.07	0.456
amiE	Streptococcus salivarius strain HSISS4	51.394	88.07	0.453
oppD	Streptococcus mutans UA159	49.042	91.579	0.449