Detailed information NTG0338293

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: EQH20_RS02530
• Genome accession: NZ_CP035260
• Coordinates: 510557..510823 (+)
• Length: 88 a.a.
• NCBI ID: WP_001819358.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901925
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	509984..510286	510557..510823	flank	271

Gene organization within MGE regions

Location: 509984..510823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH20_RS02525 (EQH20_02690)	-	509984..510431 (+)	448	Protein_502	IS30 family transposase	-
EQH20_RS02530 (EQH20_02695)	HI0659	510557..510823 (+)	267	WP_001819358.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9667.20 Da
• Isoelectric Point: 4.6537

>NTDB_id=338293 EQH20_RS02530 WP_001819358.1 510557..510823(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901925]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=338293 EQH20_RS02530 WP_001819358.1 510557..510823(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901925]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	58.442	87.5	0.511