Detailed information NTG0033755

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: SOR_RS08470
• Genome accession: NC_015291
• Coordinates: 1713242..1714240 (-)
• Length: 332 a.a.
• NCBI ID: WP_000086797.1
• Uniprot ID: -
• Organism: Streptococcus oralis Uo5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1708242..1719240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOR_RS08450 (SOR_1729)	eeP	1709625..1710881 (-)	1257	WP_000579743.1	RIP metalloprotease RseP	Regulator
SOR_RS08455 (SOR_1730)	-	1710897..1711700 (-)	804	WP_000159107.1	phosphatidate cytidylyltransferase	-
SOR_RS08460 (SOR_1731)	-	1711709..1712467 (-)	759	WP_000466694.1	isoprenyl transferase	-
SOR_RS08465 (SOR_1733)	-	1712677..1713261 (-)	585	WP_001094984.1	nucleotidyltransferase family protein	-
SOR_RS08470 (SOR_1734)	ruvB	1713242..1714240 (-)	999	WP_000086797.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SOR_RS08475 (SOR_1737)	-	1714727..1715143 (-)	417	WP_000626618.1	GNAT family N-acetyltransferase	-
SOR_RS08480 (SOR_1738)	-	1715155..1715850 (-)	696	WP_001144888.1	GNAT family N-acetyltransferase	-
SOR_RS08485 (SOR_1739)	-	1715945..1716364 (-)	420	WP_000825486.1	DUF3021 domain-containing protein	-
SOR_RS08490 (SOR_1740)	-	1716374..1716829 (-)	456	WP_000701941.1	LytTR family DNA-binding domain-containing protein	-
SOR_RS08495 (SOR_1741)	-	1716848..1717690 (-)	843	WP_000880498.1	ABC transporter permease	-
SOR_RS08500 (SOR_1742)	-	1717690..1718556 (-)	867	WP_000602877.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37270.71 Da
• Isoelectric Point: 4.5405

>NTDB_id=33755 SOR_RS08470 WP_000086797.1 1713242..1714240(-) (ruvB) [Streptococcus oralis Uo5]
MSRILDNEIMGDEELVERTLRPKYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHNDLTEIVERTADIFEMEITHEAAAELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DVITDKALTMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYNEK

Nucleotide

• Length: 999 bp

>NTDB_id=33755 SOR_RS08470 WP_000086797.1 1713242..1714240(-) (ruvB) [Streptococcus oralis Uo5]
ATGAGTAGAATTTTAGATAATGAAATCATGGGTGATGAGGAGTTGGTAGAACGTACCCTCCGTCCCAAATATTTACGTGA
ATATATCGGTCAGGACAAGGTCAAGGACCAGCTGCAAATCTTTATCGAAGCTGCTAAAATGCGTGATGAGGCGCTGGACC
ATGTACTCTTATTTGGGCCTCCAGGTTTGGGGAAAACGACCATGGCCTTTGTTATTGCCAATGAACTGGGAGTCAATCTC
AAGCAAACGTCTGGTCCTGTCATTGAAAAAGCGGGTGACTTGGTAGCTATTTTGAATGATTTGGAGCCTGGAGATGTTCT
CTTTATTGACGAGATTCATCGCCTGCCCATGTCGGTGGAAGAGGTGCTTTACAGTGCCATGGAGGACTTTTACATTGATA
TCATGATTGGGGCTGGAGAAGGCAGTCGTAGTGTTCATTTGGACTTGCCACCATTCACCTTGATTGGTGCGACAACCCGA
GCCGGTATGCTTTCAAATCCTCTGCGAGCACGTTTTGGGATTACAGGTCATATGGAATACTATGCCCATAATGATTTGAC
GGAAATTGTTGAGCGGACAGCAGATATTTTTGAGATGGAAATCACTCATGAGGCAGCTGCCGAGCTGGCCTTACGCAGTC
GTGGAACTCCTCGTATCGCCAATCGTCTCCTCAAGCGCGTGCGCGACTTTGCCCAGATTATGGGAAATGGGGTTATCGAT
GATGTCATTACCGATAAGGCTTTGACCATGTTAGATGTAGACCATGAAGGTTTGGACTATGTGGACCAAAAAATCCTTCG
CACCATGATTGAGATGTATGGTGGTGGTCCTGTAGGACTGGGAACCCTTTCTGTTAATATAGCAGAAGAACGCGAGACGG
TCGAAGATATGTACGAACCTTACCTCATCCAGAAAGGATTTATCATGCGAACTCGTTCTGGACGGGTGGCGACAGCTAAG
GCATATGAGCATTTAGGGTATGAATACAATGAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	97.892	100	0.979
ruvB	Streptococcus pneumoniae R6	97.59	100	0.976
ruvB	Streptococcus pneumoniae D39	97.59	100	0.976
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	47.892	100	0.479