Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   EQH38_RS02465 Genome accession   NZ_CP035242
Coordinates   441086..442096 (+) Length   336 a.a.
NCBI ID   WP_000990607.1    Uniprot ID   A0A0B7LZL8
Organism   Streptococcus pneumoniae strain TVO_1901947     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 436086..447096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH38_RS02435 (EQH38_02555) - 436956..437162 (+) 207 WP_000503437.1 hypothetical protein -
  EQH38_RS02440 (EQH38_02560) - 437159..437353 (+) 195 WP_000820182.1 hypothetical protein -
  EQH38_RS02445 (EQH38_02565) - 437340..438224 (+) 885 WP_000219356.1 ABC transporter ATP-binding protein -
  EQH38_RS02450 (EQH38_02570) - 438226..438963 (+) 738 WP_000832843.1 ABC transporter permease -
  EQH38_RS02455 (EQH38_02575) - 438963..440060 (+) 1098 WP_050148143.1 sensor histidine kinase -
  EQH38_RS02460 (EQH38_02580) - 440062..440661 (+) 600 WP_000866724.1 response regulator transcription factor -
  EQH38_RS02465 (EQH38_02585) ccpA 441086..442096 (+) 1011 WP_000990607.1 catabolite control protein A Regulator
  EQH38_RS02470 (EQH38_02590) - 442392..443354 (-) 963 WP_001124771.1 asparaginase -
  EQH38_RS02475 (EQH38_02595) - 443420..444808 (+) 1389 WP_000453139.1 Cof-type HAD-IIB family hydrolase -
  EQH38_RS02480 (EQH38_02600) - 444843..445295 (-) 453 WP_000079148.1 universal stress protein -
  EQH38_RS02485 (EQH38_02605) - 445366..445648 (+) 283 Protein_475 hypothetical protein -
  EQH38_RS02490 (EQH38_02610) - 445804..447018 (+) 1215 WP_000666469.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37073.01 Da        Isoelectric Point: 5.3212

>NTDB_id=337119 EQH38_RS02465 WP_000990607.1 441086..442096(+) (ccpA) [Streptococcus pneumoniae strain TVO_1901947]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIYMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKETLKKAGITYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERSSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=337119 EQH38_RS02465 WP_000990607.1 441086..442096(+) (ccpA) [Streptococcus pneumoniae strain TVO_1901947]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGTTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACCCTCTTTTCAAAGCAGGTAGATGGCATTATCTATATGGGTTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCACCAGTTGCCCAGT
GTCAATATTGACTATAAGCAAGCAACAATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAACCTTGAAAAAAGCAGGAATCACTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCCTTAGCAGAGCGTTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAGGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTAGCTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LZL8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

99.702

100

0.997

  ccpA Streptococcus gordonii str. Challis substr. CH1

87.126

99.405

0.866

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment