Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   EQY76_RS06310 Genome accession   NZ_CP035230
Coordinates   1204952..1206103 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain SRCM103551     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1199952..1211103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS06275 (EQY76_06275) yjbB 1200623..1201840 (+) 1218 WP_080478438.1 MFS transporter -
  EQY76_RS06280 (EQY76_06280) yjbC 1202005..1202583 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  EQY76_RS06285 (EQY76_06285) spx 1202764..1203159 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  EQY76_RS06290 (EQY76_06290) yjbE 1203202..1203858 (-) 657 WP_003232944.1 TerC family protein -
  EQY76_RS06295 (EQY76_06295) - 1204028..1204168 (+) 141 WP_119122854.1 hypothetical protein -
  EQY76_RS06300 (EQY76_06300) mecA 1204135..1204791 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  EQY76_RS06305 (EQY76_06305) - 1204786..1204908 (-) 123 WP_003245684.1 hypothetical protein -
  EQY76_RS06310 (EQY76_06310) coiA 1204952..1206103 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  EQY76_RS06315 (EQY76_06315) pepF 1206333..1208162 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  EQY76_RS06320 (EQY76_06320) - 1208200..1208367 (-) 168 WP_003244944.1 hypothetical protein -
  EQY76_RS06330 (EQY76_06330) spxH 1208681..1209580 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  EQY76_RS06335 (EQY76_06335) bhbI 1209577..1209975 (-) 399 WP_046380935.1 thiol management oxidoreductase -
  EQY76_RS06340 (EQY76_06340) cwlQ 1210230..1210964 (-) 735 WP_046380936.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=336364 EQY76_RS06310 WP_046380934.1 1204952..1206103(+) (coiA) [Bacillus subtilis strain SRCM103551]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=336364 EQY76_RS06310 WP_046380934.1 1204952..1206103(+) (coiA) [Bacillus subtilis strain SRCM103551]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment