Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | EQW70_RS13565 | Genome accession | NZ_CP035226 |
| Coordinates | 2573260..2573595 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103517 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2568260..2578595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQW70_RS13540 (EQW70_13540) | gcvT | 2568851..2569939 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| EQW70_RS13545 (EQW70_13545) | hepAA | 2570381..2572054 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| EQW70_RS13550 (EQW70_13550) | yqhG | 2572075..2572869 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| EQW70_RS13560 (EQW70_13560) | sinI | 2573053..2573226 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| EQW70_RS13565 (EQW70_13565) | sinR | 2573260..2573595 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| EQW70_RS13570 (EQW70_13570) | tasA | 2573687..2574472 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| EQW70_RS13575 (EQW70_13575) | sipW | 2574537..2575109 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| EQW70_RS13580 (EQW70_13580) | tapA | 2575093..2575854 (-) | 762 | WP_064671037.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQW70_RS13585 (EQW70_13585) | yqzG | 2576125..2576451 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| EQW70_RS13590 (EQW70_13590) | spoIITA | 2576493..2576672 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| EQW70_RS13595 (EQW70_13595) | comGG | 2576744..2577118 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| EQW70_RS13600 (EQW70_13600) | comGF | 2577119..2577502 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| EQW70_RS13605 (EQW70_13605) | comGE | 2577528..2577875 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| EQW70_RS13610 (EQW70_13610) | comGD | 2577859..2578290 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EQW70_RS13615 (EQW70_13615) | comGC | 2578280..2578576 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=336220 EQW70_RS13565 WP_003226345.1 2573260..2573595(+) (sinR) [Bacillus subtilis strain SRCM103517]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=336220 EQW70_RS13565 WP_003226345.1 2573260..2573595(+) (sinR) [Bacillus subtilis strain SRCM103517]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |