Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EQ843_RS10220 | Genome accession | NZ_CP035184 |
| Coordinates | 2131007..2131387 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 11A1314CRGN088 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2126007..2136387
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQ843_RS10190 (EQ843_10190) | tadA | 2126125..2126628 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| EQ843_RS10195 (EQ843_10195) | - | 2126635..2127759 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EQ843_RS10200 (EQ843_10200) | ung | 2127756..2128469 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EQ843_RS10205 (EQ843_10205) | - | 2128520..2129116 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| EQ843_RS10210 (EQ843_10210) | gspK | 2129347..2130306 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| EQ843_RS10215 (EQ843_10215) | xcpW | 2130306..2131007 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EQ843_RS10220 (EQ843_10220) | xcpV | 2131007..2131387 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EQ843_RS10225 (EQ843_10225) | - | 2131377..2131931 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EQ843_RS10230 (EQ843_10230) | - | 2131941..2132549 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EQ843_RS10235 (EQ843_10235) | - | 2132587..2133360 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EQ843_RS10240 (EQ843_10240) | - | 2133378..2133719 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EQ843_RS10245 (EQ843_10245) | - | 2133731..2134711 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| EQ843_RS10250 (EQ843_10250) | kdsB | 2134723..2135484 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=335616 EQ843_RS10220 WP_000836911.1 2131007..2131387(-) (xcpV) [Acinetobacter baumannii strain 11A1314CRGN088]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=335616 EQ843_RS10220 WP_000836911.1 2131007..2131387(-) (xcpV) [Acinetobacter baumannii strain 11A1314CRGN088]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |