Detailed information NTG0335409

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EQJ08_RS02165
• Genome accession: NZ_CP035167
• Coordinates: 431524..432672 (+)
• Length: 382 a.a.
• NCBI ID: WP_038828432.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM104008
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 426524..437672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQJ08_RS02145 (EQJ08_02145)	yclH	426904..427584 (-)	681	WP_032726533.1	ABC transporter ATP-binding protein	-
EQJ08_RS02150 (EQJ08_02150)	yclI	427599..429056 (-)	1458	WP_128441352.1	ABC transporter permease	-
EQJ08_RS02155 (EQJ08_02155)	yclJ	429269..429952 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
EQJ08_RS02160 (EQJ08_02160)	yclK	429939..431360 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
EQJ08_RS02165 (EQJ08_02165)	rapC	431524..432672 (+)	1149	WP_038828432.1	response regulator aspartate phosphatase RapC	Regulator
EQJ08_RS02170 (EQJ08_02170)	phrC	432656..432778 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
EQJ08_RS02175 (EQJ08_02175)	yczM	432878..432967 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
EQJ08_RS02180 (EQJ08_02180)	yczN	433049..433162 (-)	114	WP_014478831.1	YjcZ family sporulation protein	-
EQJ08_RS02185 (EQJ08_02185)	thrD	433315..434679 (-)	1365	WP_072173982.1	aspartate kinase	-
EQJ08_RS02190 (EQJ08_02190)	ceuB	435064..436014 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
EQJ08_RS02195 (EQJ08_02195)	yclO	436007..436954 (+)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.69 Da
• Isoelectric Point: 5.0423

>NTDB_id=335409 EQJ08_RS02165 WP_038828432.1 431524..432672(+) (rapC) [Bacillus subtilis strain SRCM104008]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMKHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=335409 EQJ08_RS02165 WP_038828432.1 431524..432672(+) (rapC) [Bacillus subtilis strain SRCM104008]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGAAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568