Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EQI48_RS12560 | Genome accession | NZ_CP035164 |
| Coordinates | 2426462..2427532 (-) | Length | 356 a.a. |
| NCBI ID | WP_004399124.1 | Uniprot ID | A0A809FNW6 |
| Organism | Bacillus subtilis strain SRCM104005 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2421462..2432532
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQI48_RS12515 (EQI48_12515) | tapA | 2421940..2422701 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| EQI48_RS12520 (EQI48_12520) | yqzG | 2422973..2423299 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| EQI48_RS12525 (EQI48_12525) | spoIITA | 2423341..2423520 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| EQI48_RS12530 (EQI48_12530) | comGG | 2423592..2423966 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| EQI48_RS12535 (EQI48_12535) | comGF | 2423967..2424350 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| EQI48_RS12540 (EQI48_12540) | comGE | 2424376..2424723 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| EQI48_RS12545 (EQI48_12545) | comGD | 2424707..2425138 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| EQI48_RS12550 (EQI48_12550) | comGC | 2425128..2425424 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| EQI48_RS12555 (EQI48_12555) | comGB | 2425438..2426475 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| EQI48_RS12560 (EQI48_12560) | comGA | 2426462..2427532 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| EQI48_RS12565 (EQI48_12565) | - | 2427745..2427942 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| EQI48_RS12570 (EQI48_12570) | corA | 2427944..2428897 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| EQI48_RS12575 (EQI48_12575) | yqhB | 2429040..2430368 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| EQI48_RS12580 (EQI48_12580) | rsbRD | 2430421..2431257 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
| EQI48_RS12590 (EQI48_12590) | mgsR | 2431481..2431861 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| EQI48_RS12595 (EQI48_12595) | yqgY | 2432093..2432338 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=335205 EQI48_RS12560 WP_004399124.1 2426462..2427532(-) (comGA) [Bacillus subtilis strain SRCM104005]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=335205 EQI48_RS12560 WP_004399124.1 2426462..2427532(-) (comGA) [Bacillus subtilis strain SRCM104005]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |