Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   EQH95_RS20490 Genome accession   NZ_CP035162
Coordinates   3817351..3817470 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SRCM103886     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3812351..3822470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH95_RS20465 (EQH95_20465) albG 3812519..3813220 (+) 702 WP_069837830.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  EQH95_RS20470 (EQH95_20470) ywhL 3813226..3814602 (-) 1377 WP_069837831.1 YncE family protein -
  EQH95_RS20475 (EQH95_20475) ywhK 3814641..3815992 (-) 1352 Protein_3953 YncE family protein -
  EQH95_RS23265 (EQH95_20480) - 3815989..3816219 (-) 231 Protein_3954 hypothetical protein -
  EQH95_RS20485 (EQH95_20485) rapF 3816222..3817367 (+) 1146 WP_069837832.1 response regulator aspartate phosphatase RapF Regulator
  EQH95_RS20490 (EQH95_20490) phrF 3817351..3817470 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  EQH95_RS20495 (EQH95_20495) - 3817568..3817995 (+) 428 Protein_3957 YbaK/EbsC family protein -
  EQH95_RS20500 (EQH95_20500) speB 3818060..3818932 (-) 873 WP_003227545.1 agmatinase -
  EQH95_RS20505 (EQH95_20505) speE 3818993..3819823 (-) 831 WP_003227543.1 spermidine synthase -
  EQH95_RS20510 (EQH95_20510) pbpG 3820025..3822100 (+) 2076 WP_069837833.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=335074 EQH95_RS20490 WP_009968329.1 3817351..3817470(+) (phrF) [Bacillus subtilis strain SRCM103886]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=335074 EQH95_RS20490 WP_009968329.1 3817351..3817470(+) (phrF) [Bacillus subtilis strain SRCM103886]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment