Detailed information NTG0335073

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: FYA12_RS10520
• Genome accession: NZ_CP043197
• Coordinates: 2159632..2160615 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O16:H48 strain PG20180061
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2154632..2165615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FYA12_RS10500 (FYA12_10500)	dppA	2155775..2157382 (+)	1608	Protein_2049	dipeptide ABC transporter substrate-binding protein DppA	-
FYA12_RS23290	-	2157416..2157526 (-)	111	Protein_2050	hypothetical protein	-
FYA12_RS10510 (FYA12_10510)	dppB	2157690..2158709 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
FYA12_RS10515 (FYA12_10515)	dppC	2158719..2159621 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
FYA12_RS10520 (FYA12_10520)	amiE	2159632..2160615 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
FYA12_RS10525 (FYA12_10525)	dppF	2160612..2161616 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
FYA12_RS10530 (FYA12_10530)	yhjV	2161646..2162917 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
FYA12_RS10540 (FYA12_10540)	ldrD	2163393..2163500 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
FYA12_RS10545 (FYA12_10545)	bcsG	2163587..2165266 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
FYA12_RS10550 (FYA12_10550)	bcsF	2165263..2165454 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=335073 FYA12_RS10520 WP_001196486.1 2159632..2160615(+) (amiE) [Escherichia coli O16:H48 strain PG20180061]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=335073 FYA12_RS10520 WP_001196486.1 2159632..2160615(+) (amiE) [Escherichia coli O16:H48 strain PG20180061]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404