Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SZO_RS03020 Genome accession   NC_012470
Coordinates   637281..638282 (+) Length   333 a.a.
NCBI ID   WP_012677612.1    Uniprot ID   A0A6M1KZY1
Organism   Streptococcus equi subsp. zooepidemicus     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 632281..643282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SZO_RS03005 (SZO_05450) - 633177..634028 (-) 852 WP_012677610.1 helix-turn-helix domain-containing protein -
  SZO_RS10855 - 634108..634242 (+) 135 WP_264947510.1 hypothetical protein -
  SZO_RS10740 - 634266..634481 (+) 216 WP_228274868.1 hypothetical protein -
  SZO_RS03010 (SZO_05460) - 634490..635848 (+) 1359 WP_228274866.1 ABC transporter ATP-binding protein -
  SZO_RS03015 (SZO_05470) - 636022..637107 (-) 1086 WP_012677611.1 M24 family metallopeptidase -
  SZO_RS03020 (SZO_05480) ccpA 637281..638282 (+) 1002 WP_012677612.1 catabolite control protein A Regulator
  SZO_RS03025 (SZO_05490) - 638352..639827 (+) 1476 WP_012677613.1 alpha-amylase -
  SZO_RS03030 (SZO_05500) - 640124..641122 (+) 999 WP_012677614.1 glycosyltransferase family 4 protein -
  SZO_RS03035 (SZO_05510) - 641124..642458 (+) 1335 WP_012677615.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36617.72 Da        Isoelectric Point: 5.7618

>NTDB_id=33463 SZO_RS03020 WP_012677612.1 637281..638282(+) (ccpA) [Streptococcus equi subsp. zooepidemicus]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTDKIRAEFSRSRTPIVLAGTVDLDHQLPS
VNIDYKAAVADVVDILAKDHQSIAFVSGPLIDDINGKVRLAGYKDGLKKNKLDFKEGLVFEANYSYKEGFDLAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=33463 SZO_RS03020 WP_012677612.1 637281..638282(+) (ccpA) [Streptococcus equi subsp. zooepidemicus]
ATGAATACAGATGATACAATCACGATTTATGATGTTGCTCGCGAAGCGGGAGTTTCAATGGCGACAGTTAGTCGAGTTGT
AAATGGTAACAAAAATGTAAAGGAAAATACCCGCAAAAAGGTCTTAGAGGTTATTGATCGTCTCGATTATCGTCCAAATG
CTGTTGCTCGTGGTCTTGCAAGTAAAAAGACAACAACAGTCGGTGTTGTGATTCCTAATATTGCAAATAGCTATTTTTCT
ATTCTGGCAAAGGGAATTGATGATATTGCTGCTATGTACAAGTACAATATTGTTCTTGCTTCAAGTGATGAGGACGATGA
TAAAGAGGTCAATGTTGTGAATACCCTCTTTGCAAAGCAGGTTGATGGCATTATTTTCATGGGACATCACTTGACTGACA
AGATTCGTGCAGAGTTTTCTCGTTCGCGTACGCCAATTGTTCTGGCAGGAACGGTTGATCTGGATCATCAGCTGCCAAGT
GTTAACATTGATTATAAGGCGGCTGTTGCTGATGTTGTGGACATTTTAGCTAAAGACCACCAAAGCATTGCCTTTGTTTC
AGGGCCGCTCATTGATGATATCAATGGAAAGGTGCGTTTGGCTGGCTACAAGGACGGGCTCAAGAAGAACAAGCTTGATT
TTAAAGAGGGTCTGGTGTTTGAAGCCAACTATTCCTATAAGGAAGGCTTTGATTTGGCTCAGCGTGTGATCAATTCCGGA
GCGACAGCTGCCTATGTTGCAGAGGACGAGCTGGCAGCAGGCCTTTTGAATGGTCTTTTTGAAGCTGGCAAGCGTGTTCC
AGAGGACTTTGAGATTATCACAAGCAATGATTCTCCAGTCGTTCAGTACACACGTCCAAATTTGAGCTCTATCAGTCAGC
CAGTCTATGACTTGGGTGCTGTTAGCATGCGTATGCTCACTAAGATCATGAATAAGGAAGAATTAGAAGAAAAAGAAATT
TTATTGAACCATGGCATTAAAAAGCGTGGGACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M1KZY1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

76.877

100

0.769
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

54.985

99.399

0.547

Multiple sequence alignment