Detailed information NTG0334578

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: EPY81_RS18790
• Genome accession: NZ_CP035109
• Coordinates: 3876641..3879073 (-)
• Length: 810 a.a.
• NCBI ID: WP_086376981.1
• Uniprot ID: A0A8I1H764
• Organism: Acinetobacter pittii strain NQ-003
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	3871957..3879843	3876641..3879073	within	0

Gene organization within MGE regions

Location: 3871957..3879843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EPY81_RS18765 (EPY81_19015)	purM	3871957..3873027 (+)	1071	WP_086376979.1	phosphoribosylformylglycinamidine cyclo-ligase	-
EPY81_RS18770 (EPY81_19020)	purN	3873024..3873653 (+)	630	WP_002118669.1	phosphoribosylglycinamide formyltransferase	-
EPY81_RS18775 (EPY81_19025)	-	3873731..3874531 (-)	801	WP_002118584.1	alpha/beta fold hydrolase	-
EPY81_RS18780 (EPY81_19030)	sppA	3874555..3875571 (-)	1017	WP_002118954.1	signal peptide peptidase SppA	-
EPY81_RS18785 (EPY81_19035)	-	3875705..3876688 (+)	984	WP_002118440.1	lysophospholipid acyltransferase family protein	-
EPY81_RS18790 (EPY81_19040)	comA/comEC	3876641..3879073 (-)	2433	WP_086376981.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EPY81_RS18795 (EPY81_19045)	lolD	3879157..3879843 (-)	687	WP_086265479.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92763.15 Da
• Isoelectric Point: 8.8520

>NTDB_id=334578 EPY81_RS18790 WP_086376981.1 3876641..3879073(-) (comA/comEC) [Acinetobacter pittii strain NQ-003]
MLKLILMGWIGGIAFMGMDIPLIMQYGWLGKVLLVMGFIFYIFKRNIFLNRPILKTIYCLVCAISLFTIGHQYAQHALNE
RLQLRQMQPKSLDIVVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVNSALDESKLQLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEPLSSDEVYQLGYQQHLKEQQKFFNRQKLNIEKFRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMFSWGLHQLVRRYYPQLYLHQPKQIWAMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFASLLLIKLPVKPFSLLVYSASLLLFCDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNLVLT
NLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNPFGNLLFQIND
VLISIVLTCFNLLEKLSLPLQGFSLTSLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQIQLNIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQTFPIKQVISNELWAEQ
IKEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSSNQNQYSCVVYIHLKQVNGYQNYLIMGDAGWEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARVQALNLPFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRNL

Nucleotide

• Length: 2433 bp

>NTDB_id=334578 EPY81_RS18790 WP_086376981.1 3876641..3879073(-) (comA/comEC) [Acinetobacter pittii strain NQ-003]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATGGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTTTTGCTTGTTATGGGCTTTATTTTTTATATTTTTAAGAGAAATATTTTCTTAAATCGCCCCATAT
TAAAAACCATTTACTGTCTAGTCTGTGCTATTAGTCTTTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATGAA
AGATTACAACTGCGACAAATGCAGCCTAAATCTTTAGATATTGTTGTGTATGTTGACCGTATAAGTGAAGAAAAAGAAGA
TAAGACACAACAACCCGTTCAGGTACTAGGGCAGTCCTTACATCCCGTCAATTGGCTTTTATATTTAAAAAATCAAAAAG
TAAACTCAGCGTTAGATGAATCAAAATTACAATTAGGCCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCCGGTGTTTTCGACCAAGAACAATGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAGTTTATCAGTTAGGTTATCAACAGCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAATTAAATATAGAAAAATTTCGTCTGACATTTAGATTAATGTTAAAACAATCTCCTTTACAAAATAAAGGACTGTTA
TTAGCTTTATTAACAGGGGACGAAAGTCTTTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATTT
GTTGGCCATTTCAGGGCCTCATGTACTCATTTTTGCCATCATGTTCTCTTGGGGATTACATCAATTAGTACGACGATATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGGCGATGATTCCATTATGTTTCGGTGTTTTGATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTACGAACTTTACTTTCAGTATTTTTATTTGCTTCTTTGTTATTAATTAAACTGCC
TGTTAAGCCATTTTCACTCTTGGTTTACAGTGCAAGTCTGCTTTTATTTTGCGATCCTTTTAGTGTTTTATCGGCAGGAT
TTTGGCTCTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATCTTGTTTTAACT
AATCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCTTTATGTCCTTT
AATGCTGATTTTCTTCCAACAGATTTCATGGGTTGCCCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGTGTGA
TTGTTCCTTTAAACATTTTTGCTGCTTGTGTATGGCTTATTTTTAACCCATTCGGAAATTTACTTTTTCAAATTAATGAT
GTCCTGATTAGTATAGTACTGACGTGTTTTAATCTTTTAGAGAAATTATCTCTACCATTACAAGGCTTTAGTCTGACATC
ACTTGATTTAGTTTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGAGTTTTACCAAAATCTTGGGGACTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCATCCCAGCAAATTCAATTAAATATTATAGATGTGGGACAGGGACAA
GCTATTTTCTTGCAACACCCGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGATGAGAAAGCTTTTAGTATTGG
TCAAAATGTGGTGATTCCATATTTACGCCAAAAGGGAATTAAACAACTGGATCACGTCGTACTATCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCTATTGCTCAGACTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGGCAGAGCAA
ATTAAAGAACCATTTACTTATTGTCATCAAGGTCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTTGTTTATATTCATTTAAAACAGGTAAATG
GCTATCAAAATTATTTAATCATGGGCGATGCAGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTAAAG
GTAGATGTTCTGGTATTAGGTCATCATGGGAGTAAGCATAGTTCAGCTTACGACTTTTTAGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAGTACAAGCACTTAATC
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTGAGCTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAATTTGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (243-521)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

• Domain of unknown function (DUF4131) (DUF4131) (28-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	69.839	99.877	0.698
comA/comEC	Acinetobacter baumannii strain A118	69.221	99.877	0.691
comA/comEC	Acinetobacter baylyi ADP1	48.529	100	0.489