Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   EPY81_RS07330 Genome accession   NZ_CP035109
Coordinates   1528615..1529019 (+) Length   134 a.a.
NCBI ID   WP_005079001.1    Uniprot ID   A0A022J074
Organism   Acinetobacter pittii strain NQ-003     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1523615..1534019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EPY81_RS07315 (EPY81_07370) relA 1524601..1526907 (+) 2307 WP_002117181.1 RelA/SpoT family protein -
  EPY81_RS07320 (EPY81_07375) - 1526954..1527727 (-) 774 WP_086376475.1 SDR family oxidoreductase -
  EPY81_RS07325 (EPY81_07380) mazG 1527840..1528646 (+) 807 WP_005079002.1 nucleoside triphosphate pyrophosphohydrolase -
  EPY81_RS07330 (EPY81_07385) comEA 1528615..1529019 (+) 405 WP_005079001.1 ComEA family DNA-binding protein Machinery gene
  EPY81_RS07335 (EPY81_07390) pcnB 1529145..1530608 (+) 1464 WP_005079000.1 polynucleotide adenylyltransferase PcnB -
  EPY81_RS07340 (EPY81_07395) folK 1530605..1531087 (+) 483 WP_044430983.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  EPY81_RS07345 (EPY81_07400) panB 1531133..1531942 (+) 810 WP_002117298.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  EPY81_RS07350 (EPY81_07405) panC 1531946..1532794 (+) 849 WP_002117191.1 pantoate--beta-alanine ligase -
  EPY81_RS07355 (EPY81_07410) rapZ 1532818..1533669 (+) 852 WP_002117179.1 RNase adapter RapZ -
  EPY81_RS07360 (EPY81_07415) - 1533666..1533935 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 134 a.a.        Molecular weight: 15484.79 Da        Isoelectric Point: 10.5869

>NTDB_id=334566 EPY81_RS07330 WP_005079001.1 1528615..1529019(+) (comEA) [Acinetobacter pittii strain NQ-003]
MQLSMNLWKNKHNIFIILFWSLISSTSVQAQSFDQNFKEWKAKQQRYDQKLSMQHSSHSNSPKSSVMTDLSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKMRLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=334566 EPY81_RS07330 WP_005079001.1 1528615..1529019(+) (comEA) [Acinetobacter pittii strain NQ-003]
ATGCAGCTCAGCATGAATCTTTGGAAGAATAAGCACAATATTTTCATTATTTTATTTTGGAGCCTGATCTCATCAACGTC
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAGGCTAAACAGCAGAGGTATGATCAGAAGTTGAGCATGC
AGCACTCCTCTCATTCTAACAGTCCAAAAAGTTCAGTTATGACTGATTTGTCAGGGCAAATACACTTGAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCAATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGCATTGGTCCAGCCATTTTTGAAAAGAATAAAATGCGTTTGACTT
TATAA

Domains


Predicted by InterproScan.

(73-133)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A022J074

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

70.073

100

0.716

  comEA Acinetobacter baumannii D1279779

69.343

100

0.709

  comEA Acinetobacter baylyi ADP1

43.548

92.537

0.403


Multiple sequence alignment