Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EPY81_RS02535 | Genome accession | NZ_CP035109 |
| Coordinates | 510248..510775 (-) | Length | 175 a.a. |
| NCBI ID | WP_002116864.1 | Uniprot ID | A0AAN4MGG3 |
| Organism | Acinetobacter pittii strain NQ-003 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 505248..515775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPY81_RS02515 (EPY81_02525) | - | 505442..506311 (-) | 870 | WP_002117066.1 | hypothetical protein | - |
| EPY81_RS02520 (EPY81_02530) | aroB | 506328..507410 (-) | 1083 | WP_002116776.1 | 3-dehydroquinate synthase | - |
| EPY81_RS02525 (EPY81_02535) | aroK | 507439..508008 (-) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
| EPY81_RS02530 (EPY81_02540) | pilQ | 508020..510185 (-) | 2166 | WP_002116833.1 | type IV pilus secretin PilQ | Machinery gene |
| EPY81_RS02535 (EPY81_02545) | pilP | 510248..510775 (-) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| EPY81_RS02540 (EPY81_02550) | pilO | 510786..511538 (-) | 753 | WP_002116684.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EPY81_RS02545 (EPY81_02555) | pilN | 511535..512176 (-) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| EPY81_RS02550 (EPY81_02560) | pilM | 512176..513234 (-) | 1059 | WP_031945632.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19265.32 Da Isoelectric Point: 9.0270
>NTDB_id=334544 EPY81_RS02535 WP_002116864.1 510248..510775(-) (pilP) [Acinetobacter pittii strain NQ-003]
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=334544 EPY81_RS02535 WP_002116864.1 510248..510775(-) (pilP) [Acinetobacter pittii strain NQ-003]
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTTCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTACAGGTAGGGAATTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATTTGGTGGAGATTGTTCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
88.571 |
100 |
0.886 |
| comL | Acinetobacter baylyi ADP1 |
75.152 |
94.286 |
0.709 |