Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EPY81_RS00770 Genome accession   NZ_CP035109
Coordinates   163734..164117 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain NQ-003     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 158734..169117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EPY81_RS00755 (EPY81_00765) pilJ 160631..162709 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  EPY81_RS00760 (EPY81_00770) pilI 162752..163288 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  EPY81_RS00765 (EPY81_00775) pilH 163349..163711 (-) 363 WP_002116220.1 response regulator -
  EPY81_RS00770 (EPY81_00780) pilG 163734..164117 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  EPY81_RS00775 (EPY81_00785) - 164402..165040 (+) 639 WP_005072790.1 hypothetical protein -
  EPY81_RS00780 (EPY81_00790) nolF 165110..166219 (+) 1110 WP_078210303.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=334531 EPY81_RS00770 WP_000389061.1 163734..164117(-) (pilG) [Acinetobacter pittii strain NQ-003]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=334531 EPY81_RS00770 WP_000389061.1 163734..164117(-) (pilG) [Acinetobacter pittii strain NQ-003]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCGGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment