Detailed information NTG0334503

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EM806_RS05380
• Genome accession: NZ_CP035106
• Coordinates: 1096293..1097093 (-)
• Length: 266 a.a.
• NCBI ID: WP_128480091.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpbs3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1091293..1102093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EM806_RS05340	-	1092263..1093048 (-)	786	WP_128480085.1	hypothetical protein	-
EM806_RS05345	-	1093048..1093434 (-)	387	WP_128480086.1	DUF1294 domain-containing protein	-
EM806_RS07560	-	1093548..1093721 (-)	174	WP_205740253.1	hypothetical protein	-
EM806_RS05350	-	1093771..1094037 (-)	267	WP_128480087.1	lysozyme	-
EM806_RS05355	-	1094121..1094444 (-)	324	WP_128480088.1	lysozyme	-
EM806_RS05360	-	1094455..1095015 (-)	561	WP_128480089.1	hypothetical protein	-
EM806_RS05365	-	1094999..1095337 (-)	339	WP_000699911.1	hypothetical protein	-
EM806_RS05370	-	1095526..1095780 (-)	255	WP_276318501.1	tetratricopeptide repeat protein	-
EM806_RS05375	dprB	1095892..1096296 (-)	405	WP_128480090.1	Holliday junction resolvase RuvX	Machinery gene
EM806_RS05380	dprA	1096293..1097093 (-)	801	WP_128480091.1	DNA-processing protein DprA	Machinery gene
EM806_RS05385	minE	1097105..1097338 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
EM806_RS05390	minD	1097335..1098141 (-)	807	WP_128480092.1	septum site-determining protein MinD	-
EM806_RS05395	ilvC	1098166..1099158 (-)	993	WP_128480093.1	ketol-acid reductoisomerase	-
EM806_RS05405	-	1099407..1100189 (+)	783	WP_128480094.1	NAD+ synthase	-
EM806_RS05410	-	1100186..1101124 (+)	939	WP_128480095.1	tetraacyldisaccharide 4'-kinase	-
EM806_RS05415	pseH	1101057..1101599 (-)	543	WP_128480096.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29815.69 Da
• Isoelectric Point: 8.2306

>NTDB_id=334503 EM806_RS05380 WP_128480091.1 1096293..1097093(-) (dprA) [Helicobacter pylori strain Hpbs3]
MKSNFQYSTLEDIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFVYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCTKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=334503 EM806_RS05380 WP_128480091.1 1096293..1097093(-) (dprA) [Helicobacter pylori strain Hpbs3]
ATGAAAAGTAACTTCCAATACAGCACGCTAGAGGATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTGTCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGTGCTAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCACCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41