Detailed information NTG0334482

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: EM803_RS05460
• Genome accession: NZ_CP035105
• Coordinates: 1105440..1106240 (-)
• Length: 266 a.a.
• NCBI ID: WP_128481510.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpbs2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1100440..1111240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EM803_RS05415	-	1101292..1102077 (-)	786	WP_128481506.1	hypothetical protein	-
EM803_RS05420	-	1102077..1102463 (-)	387	Protein_1038	DUF1294 domain-containing protein	-
EM803_RS07610	-	1102635..1102784 (-)	150	WP_164878916.1	hypothetical protein	-
EM803_RS07855	-	1102796..1102957 (-)	162	WP_014536434.1	lysozyme	-
EM803_RS05435	-	1102977..1103477 (-)	501	WP_128481508.1	glycoside hydrolase family protein	-
EM803_RS05440	-	1103488..1104048 (-)	561	WP_128481509.1	hypothetical protein	-
EM803_RS05445	-	1104032..1104370 (-)	339	WP_017280149.1	hypothetical protein	-
EM803_RS05450	-	1104560..1104943 (-)	384	WP_276318394.1	tetratricopeptide repeat protein	-
EM803_RS05455	dprB	1105039..1105443 (-)	405	WP_017282733.1	Holliday junction resolvase RuvX	Machinery gene
EM803_RS05460	dprA	1105440..1106240 (-)	801	WP_128481510.1	DNA-processing protein DprA	Machinery gene
EM803_RS05465	minE	1106252..1106485 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
EM803_RS05470	minD	1106482..1107288 (-)	807	WP_001019098.1	septum site-determining protein MinD	-
EM803_RS05475	ilvC	1107307..1108299 (-)	993	WP_128481511.1	ketol-acid reductoisomerase	-
EM803_RS05485	-	1108548..1109330 (+)	783	WP_128481512.1	NAD+ synthase	-
EM803_RS05490	-	1109327..1110265 (+)	939	WP_128481513.1	tetraacyldisaccharide 4'-kinase	-
EM803_RS05495	pseH	1110198..1110740 (-)	543	WP_128481514.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29715.65 Da
• Isoelectric Point: 8.2306

>NTDB_id=334482 EM803_RS05460 WP_128481510.1 1105440..1106240(-) (dprA) [Helicobacter pylori strain Hpbs2]
MKSNFQYSALEDIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNLINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLV

Nucleotide

• Length: 801 bp

>NTDB_id=334482 EM803_RS05460 WP_128481510.1 1105440..1106240(-) (dprA) [Helicobacter pylori strain Hpbs2]
ATGAAAAGCAATTTCCAATACAGTGCACTAGAGGATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTAATCTATCCCACAAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTGATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGTGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.094	99.624	0.947
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41