Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   EOV66_RS02380 Genome accession   NZ_CP043033
Coordinates   512593..513225 (-) Length   210 a.a.
NCBI ID   WP_000242755.1    Uniprot ID   A0A1C4FZU4
Organism   Escherichia coli strain XDL     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 507593..518225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EOV66_RS02355 (EOV66_02360) yhfG 507726..507893 (+) 168 WP_000736865.1 YhfG family protein -
  EOV66_RS02360 (EOV66_02365) fic 507883..508485 (+) 603 WP_001280625.1 putative adenosine monophosphate-protein transferase Fic -
  EOV66_RS02365 (EOV66_02370) pabA 508517..509080 (+) 564 WP_000601860.1 aminodeoxychorismate synthase component 2 -
  EOV66_RS02370 (EOV66_02375) argD 509166..510389 (+) 1224 WP_000963789.1 bifunctional acetylornithine/succinyldiaminopimelate transaminase -
  EOV66_RS02375 (EOV66_02380) yhfK 510452..512542 (-) 2091 WP_001296470.1 YccS/YhfK family putative transporter -
  EOV66_RS02380 (EOV66_02385) crp 512593..513225 (-) 633 WP_000242755.1 cAMP-activated global transcriptional regulator CRP Regulator
  EOV66_RS02385 (EOV66_02390) yhfA 513527..513931 (+) 405 WP_001148908.1 OsmC family protein -
  EOV66_RS02390 (EOV66_02395) prkB 513986..514855 (-) 870 WP_001274680.1 phosphoribulokinase -
  EOV66_RS02395 (EOV66_02400) yheU 514909..515127 (-) 219 WP_000907085.1 YheU family protein -
  EOV66_RS02400 (EOV66_02405) yheT 515121..516143 (-) 1023 WP_000057383.1 hydrolase -
  EOV66_RS02405 (EOV66_02410) yheS 516143..518056 (-) 1914 WP_000634832.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 210 a.a.        Molecular weight: 23640.43 Da        Isoelectric Point: 8.2710

>NTDB_id=334233 EOV66_RS02380 WP_000242755.1 512593..513225(-) (crp) [Escherichia coli strain XDL]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEG
QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR

Nucleotide


Download         Length: 633 bp        

>NTDB_id=334233 EOV66_RS02380 WP_000242755.1 512593..513225(-) (crp) [Escherichia coli strain XDL]
ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAA
GAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAG
ACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGC
CAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAT
TCAGGTAAACCCGGACATTCTGATGCGTCTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCA
ACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCGGATGCTATGACTCAC
CCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATCGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAT
TCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA

Domains

Predicted by InterProScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(23-109)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(142-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C4FZU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Vibrio cholerae strain A1552

95.714

100

0.957
  crp Haemophilus influenzae Rd KW20

77.941

97.143

0.757
  crp Acinetobacter baumannii D1279779

47.343

98.571

0.467

Multiple sequence alignment