Detailed information NTG0033411

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: BSN5_RS04495
• Genome accession: NC_014976
• Coordinates: 820720..821985 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis BSn5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 815720..826985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSN5_RS04475 (BSn5_04540)	yrrB	817091..817711 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
BSN5_RS04480 (BSn5_04545)	mnmA	817797..818912 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
BSN5_RS04485 (BSn5_04550)	iscSA	818943..820082 (-)	1140	WP_015714436.1	cysteine desulfurase family protein	-
BSN5_RS04490 (BSn5_04555)	cymR	820101..820517 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
BSN5_RS04495 (BSn5_04560)	rarA	820720..821985 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
BSN5_RS04500 (BSn5_04565)	tcdA	822025..822789 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
BSN5_RS04510 (BSn5_04575)	aspS	823125..824903 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
BSN5_RS04515 (BSn5_04580)	hisS	824917..826191 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
BSN5_RS04520 (BSn5_04585)	yrzK	826571..826741 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=33411 BSN5_RS04495 WP_015714437.1 820720..821985(+) (rarA) [Bacillus subtilis BSn5]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=33411 BSN5_RS04495 WP_015714437.1 820720..821985(+) (rarA) [Bacillus subtilis BSn5]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCACTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998